Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1531 ATGATTGTCGTGTCCTATTTTATTCAAAGAACCCTTCTATACCACACTGAAATAGAAAACATTAGAACCACAAGAGCTGAAAATTTCTCCATCATGCTTAAACTCCTCAACAAGAAGCTCCGTCGCCTCAGCTCCCACATCAAGTGGCCACTACGGCGTCGTTCCAAGTCCAAGCCGCGCTTCGGCAAGACCACTCCCAAACCTCACACAGAACCAAGCACCAGCACCCCCGAACCTCCCCCTCCTCCTTCCAAACCAATACGAATCGCTACGTTCAACGCCGCATTCTTCTCTATGGCACCGGTGCTTCCCCAACCAGACAAAAGCGCCACCTCAGACGACGACAACGTGGAGCGACCAAAGTCAACGTACGACCGACCGCGAGGCATATTGAAACAATCGCAGTCTCCGCTGTTGGGCAAGTCAAAGCTGCGAGTGTCGATCAACTTACCCGACAACGAGATTTCGCTGCGGCAAACGAGCTTCTCGGAGCACGAGAGAGCAAAAGGGTCGTTCTCATGGTCGTGGAGTTTCGCCGAGGGAGTGGAGGGAGAGAGGCAGAGGAAAACGGTGCTTGAAGTTCTGAGAGAGGTAAACGCCGACGTTTTGGGATTGCAAGACGTGAAGGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCTGATTTGGCTCGAGCTTTGGGGATGAACTACGTCTTCGCCGAAAGCTGGGCCCCTCAATACGGCAACGCCGTTTTGTCCAAGTGGCCCATTAAACGGTGGAAGCTGCAGAAAATCTTCGACCACACCGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCCGAAGAAGGTGAACTACAGTTTTACTGCACCAACCTTGATCATCTTGATGAGAAATGGAGAATGAAGCAGATAAATGCAATAATTGAATCTAATGAGGAGCCACACATTTTAGCTGGGGGCCTTAATTCGCTTGATGAATCGGATTATTCCCAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCGAAGGTTGAAGTCATGAAGTATCTGAAGAACAGGCAGTACAGGGATGCAAAGGAGTTTTCAGGGGAATATGAGTCTGTTGTGATGATCGCCAAAGGACAAAGTGTTCAAGGAACGTGTAAGTATGGGACTCGGGTAGATTACATATTATCTTCCTCAGATTCTCCGTATAAATTCGTTTCGGGTTCGTACTTAGTTCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTCAAAGCTGATGTGGTAAAAATAAATAGCAATCCTCAAGAAAATCTGACAAAGAAGCAAGGACAACCAGGAAACAAAGTTGTAAGAATAAAATCAACTCCATCCAAATGTATATGGAAAACACAAACTGCAGATATGGATTGA 1404 0.4687 MIVVSYFIQRTLLYHTEIENIRTTRAENFSIMLKLLNKKLRRLSSHIKWPLRRRSKSKPRFGKTTPKPHTEPSTSTPEPPPPPSKPIRIATFNAAFFSMAPVLPQPDKSATSDDDNVERPKSTYDRPRGILKQSQSPLLGKSKLRVSINLPDNEISLRQTSFSEHERAKGSFSWSWSFAEGVEGERQRKTVLEVLREVNADVLGLQDVKAEEENGMKPLSDLARALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHTDFRNVLKATIDVPEEGELQFYCTNLDHLDEKWRMKQINAIIESNEEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKNRQYRDAKEFSGEYESVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVSGSYLVLSSKGTSDHHIVKADVVKINSNPQENLTKKQGQPGNKVVRIKSTPSKCIWKTQTADMD* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1531 467 MobiDBLite consensus disorder prediction 47 87 - -
Pvu1g1531 467 MobiDBLite consensus disorder prediction 72 87 - -
Pvu1g1531 467 Gene3D Endonuclease/exonuclease/phosphatase 173 427 IPR036691 -
Pvu1g1531 467 MobiDBLite consensus disorder prediction 47 63 - -
Pvu1g1531 467 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 188 462 - -
Pvu1g1531 467 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE, PGAP2-INTERACTING PROTEIN-RELATED 26 160 - -
Pvu1g1531 467 SUPERFAMILY DNase I-like 83 425 IPR036691 -
Pvu1g1531 467 MobiDBLite consensus disorder prediction 103 136 - -
Pvu1g1531 467 MobiDBLite consensus disorder prediction 111 126 - -
Pvu1g1531 467 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 26 160 - -
Pvu1g1531 467 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 188 462 - -
Pvu1g1531 467 Pfam Endonuclease/Exonuclease/phosphatase family 185 418 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1531 Pvu-Chr1 40065475 40068502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1531 - - vra:106757483 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1531 1 40065475 40068502 Pvu1g1531 1 40065475 40068502 ECH
Pvu1g1531 1 40065475 40068502 Pvu7g1729 7 40064853 40068791 PCT