Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1718 ATGACCGGAGTGGTCATGGTTACCAAGGGAGGTAGATGCGGCGGCGGTGGGAAGCGGTCGAGGGCGGCGCGAACGGCCGAGGAAGAAGAAGAGCAGCAGAACCAGCTCTCCCTCGTGGCGTTTCTCTTGGCGGCCATCAGAAAATCGATGGTTTCGTGCAGGGTGGACCCACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCTACTAACGTTCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGTTTCCTTGGCCTTCCTTACGAATTCCAAGTTGAGATCCCTGCTAGGGTACCCAGTGCTAGTGTAAGTGTGTTTGGCGTCTCGGCAGAATCTATGCAGTGTTCTTATGATTCTAAAGGAAACAGTGTCCCCACTATTCTCCTGCTAATGCAGGACCGGCTGTACTCACAGAGAGGCTTAAAGGCTGAGGGTATATTTCGCATAAACCCAGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCTGATGACATTGATGTGCACTGCTTGGCGGGACTAATTAAAGCCTGGTTTCGAGAGCTACCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAATGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGTGTCTGCCTTACTCAGCTGGGCCATTGATCTCATGGCCGATGTCGTAGAAGAGGAGGAATTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTTATGAACTTACTCAAGACACTTATCATGAAGACACTTCGAGACCGTGAAGAATCAGCAACAGGCGGGTATTCTCCCATGTCTTTTCATTCATCGGGTCGCCACTCGGAGGATGAATATGACAGTCAGCGAGAAATGGAAACTAGTGGTGAATTGAGAGGTGCCAAATCAGATTATGATGCTCACTATGGCCAGAGCAGTGAAGGGGAGGCTGAATCTTTATGCGAGATAGAGGAGAGCTTCTTGAAGCAGTTGGATGAGAACACAACAAAGGGATTCTCACAAGAACCTGCAGGTCATTTGGAAAAGTATGTTAGCACTATAAGTTACTCTGCCTATAGCATGGAACCTTCTATGTCTGTTACTAACAACAAAGCTGGGAATTCCTGCTTTAGGACAACACTGACAGGTTTGGCCTCAAGTGTTGACACAAGTAGTTCATCAATAGGATGTACAAGCACCAAAGATGTGGAGCTGGTGGATAAATTTGCTGATTCTATTTCACCTGTGCCACTCCTTGCTTCTAGCTAA 1368 0.4766 MTGVVMVTKGGRCGGGGKRSRAARTAEEEEEQQNQLSLVAFLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQRGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTVSALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLRDREESATGGYSPMSFHSSGRHSEDEYDSQREMETSGELRGAKSDYDAHYGQSSEGEAESLCEIEESFLKQLDENTTKGFSQEPAGHLEKYVSTISYSAYSMEPSMSVTNNKAGNSCFRTTLTGLASSVDTSSSSIGCTSTKDVELVDKFADSISPVPLLASS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1718 455 MobiDBLite consensus disorder prediction 296 326 - -
Pvu7g1718 455 Gene3D Rho GTPase activation protein 102 297 IPR008936 GO:0007165
Pvu7g1718 455 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Pvu7g1718 455 MobiDBLite consensus disorder prediction 311 326 - -
Pvu7g1718 455 PANTHER MKIAA1688 PROTEIN 1 414 IPR044785 GO:0005096
Pvu7g1718 455 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Pvu7g1718 455 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 GO:0007165
Pvu7g1718 455 Pfam P21-Rho-binding domain 69 100 IPR000095 -
Pvu7g1718 455 CDD RhoGAP 132 288 - -
Pvu7g1718 455 Gene3D CRIB domain 65 101 IPR036936 -
Pvu7g1718 455 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 414 - -
Pvu7g1718 455 SMART PBD_5 70 104 IPR000095 -
Pvu7g1718 455 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 296 IPR000198 GO:0007165
Pvu7g1718 455 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1718 Pvu-Chr7 39878710 39882204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1718 - - gmx:100801481 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1718 7 39878710 39882204 Pvu7g1718 7 39878710 39882204 ECH
Pvu1g2087 1 46698852 46702061 Pvu7g1718 7 39878710 39882204 PCT