Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1708 ATGCGGCCCAGAGTAGCCTACTCCTTCCCCGAGGAGGTGCTGGAGCATGTGTTCTCCTTCATCGAGTGCGACAAGGACCGTGGTTCGATCTCCCTCGTCTGCAAGTCCTGGTACGAGATCGACCGCTGGTGCCGCCGGAGAGTCTTCGTCGGCAACTGCTATGCTGTCTCTCCGGCCGCCGTCGTCAACCGCTTCCCCAAAGTGAGATCCATTACTATCAAGGGCAAGCCGCACTTCGCAGACTTCAATTTGGTCCCCGAGGGTTGGGGCGCTTATGTCGGCCCTTGGATCAAGGCCATGGCTGCTGCCTACCCTTGGCTCCAGGAGATCAGGCTCAAGAGGATGGTCGTCACTGATGAATGCTTGGAGCTTATCGCGAAATCGTTCAAGAACTTCGGAGTGCTGGTGCTCACCTCTTGTGAGGGTTTCACCACTGATGGACTTGCTGCCATTGCCGCCCATTGCAGGAATTTGAGGGAGTTGGAGTTACGGGAGAGTGAAGTGGATGACATTTGTGGGCACTGGCTTAGCCATTTTCCCGATTCGTACACATCCTTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCTTAGAGCGTCTGGTTAGTAGGTGTCCCAATCTGCAGACTCTCCGCCTCAATCGTGCTGTGCCCCTAGACAGGCTGGCCAACCTTCTTCGTGGAGCTCCTCAATTGGCTGAGTTAGGCACAGGAGCCTACACGACTGAGATGCGGCCGGAAGTCTTTTCGAACCTGGCCGAAGCATTTTCTGGATGCCGTCAATTGAAAAGCTTGTCTGGATTTTGGGACGTGCTCCCCTCCTACCTTCCAGCTGTTTATCCTATCTGCTCCAACCTGACATCACTAAACATGAGTTATGCAACTATTCAAAGTCCTGATCTTACCAAGCTTGTTAGTCAGTGTGAGAATTTACAACGGTTATGGGTGTTGGATTACATAGAAGATGCTGGCCTTGAAGTGATTGCTGCGTCATGTAAGGATCTGAGGGAGTTGAGGGTGTTTCCGTCTGACCCATTTGGGTTAGAACCAAATGTAGCATTGACAGAGCAGGGCCTTGTTTCTGTGTCTGAAGGCTGTTCCAAGCTCCAGTCAGTTCTATATTTTTGTCGTCAAATGTCTAACGCGGCCTTGCTTACAATTGCCAGGAACAGACCTAATATGACTCGTTTTAGACTGTGTATTATTGAGCCTCAAGTTCCAGACTATCTTACCCATGATCCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCGTCGCCTTTCCCTTTCTGGGCTTCTTACTGACCGCGTTTTTGAGTATATTGGGACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGCGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCCCTTTTAGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTTGGTGAGTTACGGAGCATGTAAACTGCTGGGTCAGAAAATGCCGATGCTTAATGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCGAGGCCGGATAGTAGTCCTGTTGAGAAGCTATACATATACAGGACTGTTTCTGGGCCAAGATTGGACATGCCAGGCTATGTATGGAGAATGGAAGATGATTCTGCATTAAGAATTTCTTGA 1758 0.4972 MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIDRWCRRRVFVGNCYAVSPAAVVNRFPKVRSITIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVVTDECLELIAKSFKNFGVLVLTSCEGFTTDGLAAIAAHCRNLRELELRESEVDDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLANLLRGAPQLAELGTGAYTTEMRPEVFSNLAEAFSGCRQLKSLSGFWDVLPSYLPAVYPICSNLTSLNMSYATIQSPDLTKLVSQCENLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCSKLQSVLYFCRQMSNAALLTIARNRPNMTRFRLCIIEPQVPDYLTHDPLDAGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPMLNVEVIDERGPPDSRPDSSPVEKLYIYRTVSGPRLDMPGYVWRMEDDSALRIS* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1708 585 SMART fbox_2 9 50 IPR001810 GO:0005515
Pvu7g1708 585 Pfam Transport inhibitor response 1 protein domain 66 112 IPR041101 -
Pvu7g1708 585 Pfam F-box 7 47 IPR041567 -
Pvu7g1708 585 SUPERFAMILY RNI-like 68 534 - -
Pvu7g1708 585 Gene3D - 1 45 - -
Pvu7g1708 585 SMART LRR_CC_2 480 504 IPR006553 -
Pvu7g1708 585 SMART LRR_CC_2 371 395 IPR006553 -
Pvu7g1708 585 SMART LRR_CC_2 431 454 IPR006553 -
Pvu7g1708 585 SUPERFAMILY F-box domain 7 47 IPR036047 GO:0005515
Pvu7g1708 585 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 6 576 - -
Pvu7g1708 585 Gene3D Ribonuclease Inhibitor 46 576 IPR032675 -
Pvu7g1708 585 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1708 Pvu-Chr7 39763251 39766503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1708 K14485 - gmx:100809794 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1708 7 39763251 39766503 Pvu7g1708 7 39763251 39766503 ECH
Pvu1g2099 1 46818070 46823759 Pvu7g1708 7 39763251 39766503 PCT