Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2099 ATGCAGAGAATGGCCTACACGTTCTCGTTTCCGGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATTCTGAGCGAGAGGGACCGGAACGCGATCTCACTGGTGTGCAAGTCGTGGTACGAGATCGAGCGGTGTTGCAGGAGGAAGGTTTTTGTGGGTAACTGCTACGCGGTGAGCCCAGTGATGGTGATCAAGCGGTTCCCGGAACTGAGATCCATTTCGCTCAAGGGGAAGCCGCACTTCGCGGACTTCAATTTGGTCCCCGAGGGTTGGGGCGGTTACGTCTGTCCCTGGATCGCCGCCATGGCATGCGCCTTCCCCTGCCTCGAAGAGATCAGACTCAAGAGGATGGTCATCACTGACGAGAGCTTGGAACTCATCGCCAAGTCCTTCAAAAACTTCAAGGTGCTGGTTCTCACTTCTTGCGAGGGTTTCACCACTGACGGACTGGCCGCCATTGCTGCCAACTGCAGGAATTTGAAGGAGTTGGACTTGCAGGAGAGTGAAGTGGATGACCTTAGTGGGCACTGGCTAAGCCATTTTCCTGATTCCTTCACCTCACTAGTTTCACTTAACATCTCTTGTTTAGGCAATGAGGTGAGTTTATCTGCACTAGAGCGTCTGCTTGGGAGGTGTCCCAACCTGCAGACCCTGCGCCTCAATCGTGCTGTGCCCCTGGATAGACTACCCAATCTACTTCGTCGTTGTCCTCAGCTGGTTGAGTTAGGCACTGGAGTCTACTCAACTGAAATGCGACCAGAGGTCTTCTCAAACCTGGAAGCTGCATTTTCGGGGTGCAAGCAGTTGAAGAGCTTGTCTGGCTTTTGGGACGTGCTCCCATCCTACCTTCCAGCTGTCTACCCTGTCTGCTCCAGGCTAACATCACTAAACTTGAGTTATGCTATTATTCAGAGCCCTGATCTTATTAAGCTTATCAGTCAATGCCCAAATTTGTTGCGGTTATGGGTTCTGGATTACATAGAAGATGCTGGTCTTTATAACCTTGCTGCATCATGCAAGGATCTAAGGGAGTTAAGGGTGTTTCCGTCTGACCCATTCGGTTTAGAACCAAATGTTGCATTGACGGAAAAGGGCCTTGTGTCCGTGTCTGAAGGTTGTCCCCGGCTCCAATCAGTTCTATATTTTTGTCGTCAAATGTCTAATGCAGCCCTGCATACAATTGCGCTGAACAGGCCTAATTTGACTCGTTTTCGGCTTTGTATTATTGAGCCTAAAACGCCTGACTATCTTACGCATGAACCACTTGATTCTGGTTTTGGAGCTATTGTAGAACATTGCAAGGATCTGCAACGCCTATCCCTATCTGGTCTTCTTACTGATCGTGTTTTCGAGTATATTGGGACTTACGGGAAGAAGCTGGAGATGCTATCCGTGGCTTTTGCTGGAGATAGTGATTTGGGACTTCATCACGTGCTGTCTGGATGTGATAATCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAGGCGCTTTTGGCAAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCCTGCTCAGTGAGTTATGGAGCATGTAAGGTACTGGGTCAGAAAATGCCCAGACTCAACGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGATAATTGTCCTGTTGAGAAGCTTTATATTTACAGGACTATTGCCGGGCCAAGGTTGGACATGCCTGGTTTTGTGTGGACTATGGAAGATGATTCTTCACTAGGCTTGAGTGATCATGCTGTGGAATGA 1776 0.4938 MQRMAYTFSFPEEVLEHVFSFILSERDRNAISLVCKSWYEIERCCRRKVFVGNCYAVSPVMVIKRFPELRSISLKGKPHFADFNLVPEGWGGYVCPWIAAMACAFPCLEEIRLKRMVITDESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLKELDLQESEVDDLSGHWLSHFPDSFTSLVSLNISCLGNEVSLSALERLLGRCPNLQTLRLNRAVPLDRLPNLLRRCPQLVELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSRLTSLNLSYAIIQSPDLIKLISQCPNLLRLWVLDYIEDAGLYNLAASCKDLRELRVFPSDPFGLEPNVALTEKGLVSVSEGCPRLQSVLYFCRQMSNAALHTIALNRPNLTRFRLCIIEPKTPDYLTHEPLDSGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKVLGQKMPRLNVEVIDERGPPDSRPDNCPVEKLYIYRTIAGPRLDMPGFVWTMEDDSSLGLSDHAVE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2099 591 SUPERFAMILY RNI-like 27 535 - -
Pvu1g2099 591 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 8 578 - -
Pvu1g2099 591 Pfam Transport inhibitor response 1 protein domain 67 113 IPR041101 -
Pvu1g2099 591 Pfam F-box 8 48 IPR041567 -
Pvu1g2099 591 Gene3D Ribonuclease Inhibitor 47 577 IPR032675 -
Pvu1g2099 591 Gene3D - 3 46 - -
Pvu1g2099 591 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 8 578 - -
Pvu1g2099 591 SMART LRR_CC_2 432 455 IPR006553 -
Pvu1g2099 591 SMART LRR_CC_2 130 155 IPR006553 -
Pvu1g2099 591 SMART LRR_CC_2 105 129 IPR006553 -
Pvu1g2099 591 SMART LRR_CC_2 314 337 IPR006553 -
Pvu1g2099 591 SMART LRR_CC_2 481 505 IPR006553 -
Pvu1g2099 591 SMART LRR_CC_2 372 396 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2099 Pvu-Chr1 46818070 46823759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2099 K14485 - gmx:100779021 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2099 1 46818070 46823759 Pvu1g2099 1 46818070 46823759 ECH
Pvu1g2099 1 46818070 46823759 Pvu7g1708 7 39763251 39766503 PCT