Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1638 ATGGACTCTCTCCCTAGAATTCACCACCATCACTTCTCACTCTCTCACTCCCTTCCACAACGGAGTCTGAAGTTCTTCCATGGTTCAACACCCTTCTCTTCCCTTCCTCCATTCTCCTCCATCAGAGCCTCATCTTCATCTTCACCCAGACAAAATGCATTTCAGAAACCCCAAACCGCCATAAACCACCTTCTCAAAACCCTAGACCCTCTTCTCTCCCCTCTCGTCAAACCCACCTGCATCGCCATAGCCACCACCGCTTTCTCCTTCATGCGCCTCCACCCTCCCCCGGTTGCATCGGCACTTCCACATGCCCCTCCGCCACCCTCCTCCGCGTCGGAAATTCTTCCCGACGACACGGCCGCGTCGGAAACTCTCTCTGACGACGCGGCCGCGTCGGAAAATATCTCCGTCGACACGGCCGCGTCGGATACTCTCTCCGAAGAGAGAGCCGCGTTGGAAACTCTCTCCGACGAGAGAACCGCCGAAGAGCAATCGAGCGACGACGTCCTAGAGCTTGAGTCCCTCCTACGGACTAAAATCAAAGCCAGCGAAATCAACGAAGCGCTCCTCGTCCTGGACCGTCTAATCGAACTCGAACCGGAGGAGCTCGAGTACCCGTTCGTGAAGGCGCACCTGCGCCTGCTCAACGGCGAGAACGAACTCGCCGCGAAGGAGTTTGAGGACTTGCTTCAGAGGGATCCGTTCCACGTGGAGACGTATCGATGCCTGTTAATGCTAATTTCGGAGACGAAGGCGCCGACCATGGAGCTTCTGAAGAAAATCGAAGAGGCCGTGAAGGTTTGCGCGGAGCAAGGGAAGGATTCCGAAGTGAGAGACTTTAAGTTGTTGATTGCGCAGATAAAGGTTATCAATGGGGATTTATCTGATGCGATGAAGGTGTATGAGGAGCTTGAGAAGGAAGAACCCCAGGATTTTAGACCTTACTTGGGTCAGGGTATTGTGTATACTATGCTGAAGAAGAATGATGAAGCTGAGAAGCAATTTGAGAAGTTTCGCACGCTTGCTCCTGATAATCATCCTTATAAACAGTATTTTGAGGACAATTCTAGCATTTTGGAGACGGGACTACTAGATGCAAAGAGCTGA 1110 0.5234 MDSLPRIHHHHFSLSHSLPQRSLKFFHGSTPFSSLPPFSSIRASSSSSPRQNAFQKPQTAINHLLKTLDPLLSPLVKPTCIAIATTAFSFMRLHPPPVASALPHAPPPPSSASEILPDDTAASETLSDDAAASENISVDTAASDTLSEERAALETLSDERTAEEQSSDDVLELESLLRTKIKASEINEALLVLDRLIELEPEELEYPFVKAHLRLLNGENELAAKEFEDLLQRDPFHVETYRCLLMLISETKAPTMELLKKIEEAVKVCAEQGKDSEVRDFKLLIAQIKVINGDLSDAMKVYEELEKEEPQDFRPYLGQGIVYTMLKKNDEAEKQFEKFRTLAPDNHPYKQYFEDNSSILETGLLDAKS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1638 369 Gene3D Tetratricopeptide repeat domain 140 363 IPR011990 GO:0005515
Pvu7g1638 369 MobiDBLite consensus disorder prediction 125 144 - -
Pvu7g1638 369 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 131 364 - -
Pvu7g1638 369 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 136 - -
Pvu7g1638 369 Coils Coil 146 166 - -
Pvu7g1638 369 SUPERFAMILY TPR-like 181 347 IPR011990 GO:0005515
Pvu7g1638 369 MobiDBLite consensus disorder prediction 151 169 - -
Pvu7g1638 369 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
Pvu7g1638 369 MobiDBLite consensus disorder prediction 125 169 - -
Pvu7g1638 369 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 131 364 - -
Pvu7g1638 369 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 136 - -
Pvu7g1638 369 Coils Coil 213 233 - -
Pvu7g1638 369 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1638 Pvu-Chr7 38590931 38593397 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1638 - - vra:106770360 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1638 7 38590931 38593397 Pvu7g1638 7 38590931 38593397 ECH
Pvu1g1775 1 43454903 43456339 Pvu7g1638 7 38590931 38593397 PCT