Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1775 ATGTTCAGTCTCATATCTCCAACTGGGGCTTTACCCATGGATTCTCTTCCAAAACTGCGCCACTCCAATCTCACTCTCAGCCACCACACTTCTCCATTACCCACGCTCTTATCCTCTTCCCTCTCTTTCCGCTCTCGACCACCACCACACTTTCCCTCTTCATCGTCGTTCAGGTTACCTTCCATCAGAGCCTCCTCTTCACTCTCCTCAAACGACCCTGCGTTTCACTCCTCCAAAAACGCCCTCTCTCTATCCCCACTTCTCCAAACCCTAAACTCCTTCCTCTCCCCCCTCGCCCAAACCACCTGCATCGTCATCGCCGCCACCGCCTTCTTCTTCATGCGATTCCACCACACGCCCGCCATCGCCGCCACCCTCTCCCCGCCCGCTGCCGACTCCGAGACTGCGCTCACCGAGGAGGAAGCCGAGAGAGTTCTGGAGGAGCGGCTCAGCGCCAACCCCGCCGACGTCGACGCTCTGCGCGCGCTCATGGAGTGCAAGATCAAAGCGCGCAAGCTTGACGAAGCGTTCGCCGTTCTGGACCGTCTCATCGAGCTCCAGCCGGAGGAGTACGAGTGGCCGCTGCTGAAGGCCAACATGCACATCTACAACGACGAACACGCCGCTGCGCGTGAACTGTTCGAGGAAATGTTGAAGAAGGACCCGCTCCGCGTGGAAGCGTTCCACGGCCTCGTCATGGCGACTTCGCAGTTGAATGAGCCGTTGAGAGCGTTGTTGAAGAGAGTACAGGCGGCGACTGAGACTTGCAAGAAGCAGAAGAGGGACTCGGATGTGAGGGACTTCAGGCTCTTGATTGCGCAGATTAAAGTGATGGAAGGGGATTTCCCTGAGGCGCTTAAGGCTTATCAGGATTTGGTGAAGGAAGAACCCAGAGATTTCAGGCCTTATTTGTGTCAGGGTATTATATATACCCTCTTAAGGAAGAAAGACGAAGCTGATAAGCAATTTGATAAGTTTCGCAGGCTTGTTCCTAAGGACCATCCTTACATGGAGTATTTTGAGGACAACATGTTCGCGACCAAATTCTTCTCGCAGAAACTGGAGAGGGAGGGAGCAGGTGCTAGGGACTGA 1092 0.5485 MFSLISPTGALPMDSLPKLRHSNLTLSHHTSPLPTLLSSSLSFRSRPPPHFPSSSSFRLPSIRASSSLSSNDPAFHSSKNALSLSPLLQTLNSFLSPLAQTTCIVIAATAFFFMRFHHTPAIAATLSPPAADSETALTEEEAERVLEERLSANPADVDALRALMECKIKARKLDEAFAVLDRLIELQPEEYEWPLLKANMHIYNDEHAAARELFEEMLKKDPLRVEAFHGLVMATSQLNEPLRALLKRVQAATETCKKQKRDSDVRDFRLLIAQIKVMEGDFPEALKAYQDLVKEEPRDFRPYLCQGIIYTLLRKKDEADKQFDKFRRLVPKDHPYMEYFEDNMFATKFFSQKLEREGAGARD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1775 363 Coils Coil 242 262 - -
Pvu1g1775 363 Pfam Tetratricopeptide repeat 270 298 IPR019734 GO:0005515
Pvu1g1775 363 Pfam Tetratricopeptide repeat 141 198 - -
Pvu1g1775 363 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 13 356 - -
Pvu1g1775 363 Gene3D Tetratricopeptide repeat domain 138 253 IPR011990 GO:0005515
Pvu1g1775 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 13 356 - -
Pvu1g1775 363 SUPERFAMILY TPR-like 140 332 IPR011990 GO:0005515
Pvu1g1775 363 Gene3D Tetratricopeptide repeat domain 254 355 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1775 Pvu-Chr1 43454903 43456339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1775 - - vra:106756779 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1775 1 43454903 43456339 Pvu7g1638 7 38590931 38593397 PCT