Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1605 ATGGAGGAAGCGCTTGAGCTCGCACGCGCCAAGGACGCCAAGGAGAGGATGGCCGGCGTGGAGCGCCTCCACGAGGTTCTCGAAGCTTCTAGGAGGAGCCTCAGTTCCGCCGAAGTCGCCTCGCTCGTCGAATGCTGCCTGGATCTCTTGAAGGACAGCAGCTTCAAGGTGTCGCAGGGCGCGCTTCAGGCGCTCGACTCCGCTGCCGTTCGCGCTGGCGACCACTTCAAGCTCCACTTCAATGCGCTCGTTCCCGCCGTCGTCGAACGGTTAGGCGACGCCAAACAGCCTGTCCGCGACGCCGCCAGACGCCTATTGCTCACTCTCATGGAGGTTTCATCTCCCACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACGTGCAAAAGCTGGAGAATCCGAGAGGAATTTGCGCGAACTGTCACTTCTGCTATTGGTCTATTTTCAGCGACTGAGCTTCCTCTTCAACGTGCTATTCTTCCTCCTATTCTTCAGTTGCTTAATGATCTGAATGCTGCTGTCAGGGAAGCTGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGTCACAATCTTCCTTCATCTCTGGTGAAAGCTATTAATGCTAGACTAGAGGGAATTCAACCAAAAGTTCAATCTTCAGATGGTATTTCTAGTGGTTATACTGCTGGGGAAATTAAGCCGGTGGGTGTTAATCCCAAAAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGAGCTCTCTTTTTGGAGGAGAAGGTGATGTTACAGAGAAAGTCATAGACCCGATCAAGGTGTATTCAGAGAAGGAGTTACTAAGAGAAATTGATAAGATTGCAGCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTACTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGGCCTTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTGAAGCAGGTTTGCCATCTATTATGCTTTTTGTCAAAGGACCTCTTGGGTGATTTTGAAGCATGTGCTGAACTATTCATACCAGTCCTTTTGAAGCTAGTTGTGATTACTGTGCTTGTAATTGCAGAATCTGCAGATAACTGCATAAAAACGATGTTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGCTGATTGTGCAAAAAATGATCGCAATGCTGTACTTCGTGCAAGGTGTTGTGATTATGCTCTTTTGATTCTAGAACATTGGCCTGATGCAGCAGAAATACAACGATCGGCTGATTTATATGAGGATATGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTGCGGTCAACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCAGAACGTTCCCGCCGCCTGTTTTCATCCTTTGACCCTGCTATTCAAAGGTTAATAAATGAAGAAGATGGAGGAATGCATAGGAGACATGCATCACCTTCTGTTCGTGATAGAGGTGCATTGGTATCAATGGCTAGTCAAGCTTCAGCTCCCTCTAGTCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACTTCTATTGCCTCTGGCGTTCTTTCACAAGCCAAGTCACTTGGTAAAGGTACTGAACGCAGTTTGGAAAGTGTGCTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTCTGATAAGCATGGTTCATCTGTTCTCCGGTCTTCGAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCCGCTGCTGTCTCGGCATCTAATCATCTGACTAACTCTTTAATGACGGAGTCAACTGCTTCTGGTGCCAATAAAGGTAGCAACCGCAATGGTGGTTTGGGTTTGTCTGACATAATTACCCAAATTCAAGCTTCCAAAGACTCTGGCAGGTTATCATATAGTACTAATGTTGGTATTGAGCCTTTATCAGCATATTCATCATACTCAAGTAAAAGAGCTTCTGATAAATTACAAGAAAGAAGTTCTGTTGATGAAAATAGTGACATCAGGGACACTAGACGATATATGAACCCCAACGTAGATAGGCAGTATATGGATACCCATTACAGGGATGCCAACTTTAGGGACTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTGTCTCTGCTGGCAGCAGGAGGAGTTTGGATGATAGCCAATTATCTCTTGGAGAGATGTCAATTTATGCAGATGGACCAGCATCTCTTCATGAAGCTCTGAGTGAAGGGCTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCCTTGTTGCAGCAAGGTCAAAAGGGAATTCAAGAGGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGCAGATATTATTCTGGCATGTCGAAAGCCCTTCGAGGGCTACATGGAACGGATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTAGTTAGGCAAGCCTGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGACTCTCTCTTGCCTGCATTGCTACGTGCACTAGATGAGCAAAGGTCTCCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAGTAAGTTCCTTTAACAAGCATTCAATGAATCCAGAAGGTGCTGCAAATACTGGCATTCTAAAATTATGGCTTTCCAAGTTAGTTCCGTTGGTTCACGATAAAAATACAAAACTTAAAGAAGCAGCTATTACATGCATTATATCGGTGTACTCTCACTTTGATTCATCCGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGACGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGGATTGAAGTAGACTTAATGAATTATCTGCAGAACAAGAAAGAGCGACGTTCCAAGTCTTCCTATGATTCATCTGATGTAGTGGGAGCATCCTCTGAAGAGGGATATACTGGTTTGTCTAGGAAAGCTCATTACATTGGAAGGTATTCAGCTGGTTCACTGGATAGTGATGGTGGCAGGAAGTGGAGTTCCCAAGATTCCTCTCTGATTAAAGCCAATCTTGGCCATGCAGCTTCTGATGAATCTGAGGAACATACTGATTCTAATAGTGGTATTATTGGTTTAAAAACTAAAGATCTTGCTTATACAGTCAATTCAATGAGTCAAAACTTTGGCTTTCAAACTAGCCAAGTTGGACATGTAGACAGTAGCATGAATTTTGAAGGTCTATCATCTGATCTGGATATTAATGGTCTGATGTCATCAGAATATTTAAATATTGCTGAAGACTTTGGACTTGACAAAGAATATCCCTCTGAATTGAACCATAATCATCAGTCAGTTGAAGGTGTGAAAGTAAACTACATGACTGACACTGGACCCAGTATTCCTCAGATTCTTCATATGATATGCAGTGAGGGTGATGGAAGCCCTATTTTGAGCAAGCAGACTGCACTTCAACAGCTAGTTGAAGTGTCTATAGCTAATGATCATTCCGTTTGGACTCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAAGTGCTGGATGATTCAGATTCCTCAATCAGAGAGATTGCTCTGTCTCTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAGACTTCTGTTGAGCTGGTTGTTGAAAAACTGCTTAATGTTGCAAAGGATATTGTTCCCAAGGTCTCAAACAAAGCAGAGCAATGCCTCACCAGTGTTTTATCTCAGAATGATCCGTTTAGATGTTTAAGTGTTATTGTTCCTCTACTGGTTACTGAGGATGAGAAAACTCTTGTCACTAGCATAAATTGCTTAACGAAGCTTGTGGGGCGTCTTTCTCAAGAGGAACTGATGGCCCAGTTACCCTCTTTTCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACCGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGGAAGGGCTTAATAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAGGCAAGGACAGGAAAAACAATTGATACAACTCAAGTCTAG 4314 0.4339 MEEALELARAKDAKERMAGVERLHEVLEASRRSLSSAEVASLVECCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKSWRIREEFARTVTSAIGLFSATELPLQRAILPPILQLLNDLNAAVREAAILCIEEMYAQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVQSSDGISSGYTAGEIKPVGVNPKKSSPKAKSSSRESSLFGGEGDVTEKVIDPIKVYSEKELLREIDKIAATLVPEKDWSIRIAAMQRIEGLVLGGATDYPCFFGLLKQLVGPLSTQLSDRRSSIVKQVCHLLCFLSKDLLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCDYALLILEHWPDAAEIQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSVRDRGALVSMASQASAPSSLTGYGTSAIVAMDRSSSLSSGTSIASGVLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHGSSVLRSSSLDLGVDPPSSRDPPFPAAVSASNHLTNSLMTESTASGANKGSNRNGGLGLSDIITQIQASKDSGRLSYSTNVGIEPLSAYSSYSSKRASDKLQERSSVDENSDIRDTRRYMNPNVDRQYMDTHYRDANFRDSQNSYVPNFQRPLLRKNVAGRVSAGSRRSLDDSQLSLGEMSIYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDSLLPALLRALDEQRSPKAKLAVIEFAVSSFNKHSMNPEGAANTGILKLWLSKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDSSDVVGASSEEGYTGLSRKAHYIGRYSAGSLDSDGGRKWSSQDSSLIKANLGHAASDESEEHTDSNSGIIGLKTKDLAYTVNSMSQNFGFQTSQVGHVDSSMNFEGLSSDLDINGLMSSEYLNIAEDFGLDKEYPSELNHNHQSVEGVKVNYMTDTGPSIPQILHMICSEGDGSPILSKQTALQQLVEVSIANDHSVWTLYFNQILTVVLEVLDDSDSSIREIALSLIVEMLKNQKDAMETSVELVVEKLLNVAKDIVPKVSNKAEQCLTSVLSQNDPFRCLSVIVPLLVTEDEKTLVTSINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKTIDTTQV* 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1605 1437 Gene3D - 1 222 IPR011989 -
Pvu7g1605 1437 Gene3D - 1221 1429 IPR011989 -
Pvu7g1605 1437 Gene3D - 267 507 IPR011989 -
Pvu7g1605 1437 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Pvu7g1605 1437 PANTHER CLASP 28 1429 - -
Pvu7g1605 1437 Gene3D - 796 1020 IPR011989 -
Pvu7g1605 1437 SMART TOG_3 3 224 IPR034085 -
Pvu7g1605 1437 SMART TOG_3 282 514 IPR034085 -
Pvu7g1605 1437 SMART TOG_3 780 1028 IPR034085 -
Pvu7g1605 1437 SMART TOG_3 1210 1429 IPR034085 -
Pvu7g1605 1437 PANTHER PROTEIN, PUTATIVE-RELATED 28 1429 - -
Pvu7g1605 1437 MobiDBLite consensus disorder prediction 239 263 - -
Pvu7g1605 1437 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Pvu7g1605 1437 MobiDBLite consensus disorder prediction 247 261 - -
Pvu7g1605 1437 MobiDBLite consensus disorder prediction 611 633 - -
Pvu7g1605 1437 Coils Coil 10 30 - -
Pvu7g1605 1437 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Pvu7g1605 1437 Pfam CLASP N terminal 802 996 IPR024395 -
Pvu7g1605 1437 Pfam CLASP N terminal 285 500 IPR024395 -
Pvu7g1605 1437 SUPERFAMILY ARM repeat 3 1408 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1605 Pvu-Chr7 38009322 38026350 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1605 K16578 - gmx:100775793 2543.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1605 7 38009322 38026350 Pvu7g1605 7 38009322 38026350 ECH
Pvu1g1747 1 43073004 43085808 Pvu7g1605 7 38009322 38026350 PCT