Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1747 ATGGAGGAGGCGCTGGAACTGTCACGCGCGAAGGACACGAAGGAGAGGATGGCGGGAGTGGAGCGCCTCCACCAACTTCTCGAAGCTTCCAGAAAGAGCCTCTCGTCTTCCGAGGTGACCTCGCTCGTTGACACTTGTATGGATCTCTTGAAGGACAATAACTTCCGCGTCTCGCAGGGCGCGCTCCAGGCGCTCGCCTCCGCCGCCGTCCTCTCCGGCGACCACTTCAAGCTCCACTTCAACGCACTCCTCCCCGCCATCGTCGACCGTCTCGGCGACGCCAAGCAGCCCGTCCGAGACGCCGCCAGGCGCCTCTTGCTCACTCTCATGGAGGTTTCTTCTCCAACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAGGAGTTTACACGAACTGTCACAGCTGCAATTAATTTATTTGCAGCTACAGAGCTCCCACTTCAACGGGCTATCCTCCCCCCTGTGTTGCATTTGCTTAACGATCCAAATCCTGCTGTTAGAGAAGCAGCTATTTTGTGCATTGAAGAAATGTATACACAAGCTGGGCCTCAATTTCGTGATGAACTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCAAGGCTTGAAGGAATTCAGCCGAAAGTTCGCTCTTCAGATGGTATTTCAGGTGGATATATTACTGGGGAAATTAAGCATTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGCTCCTCCAGGGAAACCTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCATAGACCCTGTGAAGGTATATTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACTCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCCATGCAGAGAGTTGAAGGTCTTGTTATAGGAGGTGCTGCGGATTATCCTTGTTTCCGTGGGCTCTTGAAGCAACTTGTTGGGCCTTTAAGTACACAATTGTCAGACCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGGATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTTCAGATAACTGCATAAAAACGATGTTACGCAACTGCAAAGTTGCTCGTGTTCTTCCACGTATAGCTGATAGTGCAAAAAATGATCGAAATGCTGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTGGAACATTGGCCTGATGCGCCAGAAATACATCGATTGGCTGATTTATACGAGGATATGATAAAGTGTTGTGTTAAAGATGCAATGAGTGAGGTTCGATCTACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGATCTCGTCGTCTATTTGCATCCTTTGACCCTGCCATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATCGGCGACATGCTTCACCTTCCATTAGAGATAGAGGTGGACTGACGTCATTGGCTAGTCAAACCTCGGCTCCTTCTAATCTACCTGGTTATGGAACTTCTGCTATAGTTGCGATGGATAGAAGTTCGAGTATATCATCAGGGACATCTATCTCCTCTGGTATACTTCTATCACAAGCCAAGTCACTTGGGAAGGGTACAGAACGTAGTCTGGAAAGCATGTTACATGCAAGCAAGCAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCCGATAAGCATAATTCATCTTTCCGGTCATCGAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCAGCCGTTTCTGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTGCTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACCCAGATTCAAGCTTCAAAAGATTCTGCCAAGTTGTCCTATCATAGCAGTGTTGGTATTGAACCTTTATCATCAATATCATCATATTCAAGTAAAAGGGCCTCTGAAAGATTACATGAAAGAAGTTCACTTGATGATAACATTGATATTAGGGAGACTAGGCGATTTATGAAACCCAACCACGAAAAGCAGTATTTGGATGCCCCTTACAGAGATGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGGTGCCAAATTATGCAGAAGGACCCTCATCGCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGAGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGGCCAAAGGGAGTTATAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAAGCTGCTCTTTCAACACTTGCAGATATTGTTCTTGCATGCCGAAAGCCTTTTGAAGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGATCCTAAAGAACTTGTCAGGCAGCCATGTGCAGCAACTTTGGAAGTTGTGAGCAAAACTTACAGTATAGATTCTCTTTTACCGGCACTACTACGCTCACTAGATGAACAGAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATTCTATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTGACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTATTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCTTTAAAACAATATACCCCTCGCATTGAAGTAGACCTAATCAACTATCTGCAGAACAAGAAAGAAAGACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTGGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAGGCTCATTACCTTGGAAGGTATTCTGCTGGATCCCTTGATGGTGATGGTGGTAGGAAATGGAGTTCCCAGGATTCAACACTAGTGAAAGATAGTCTTGGTCAAGCATCATTTGGTGAAACTCAGGAACCTCTGTATCAAAATTTTGAAACTGATCCTAATAGTGGCAGTCTTGCTTCAAAAACTAAAGATCTTGTTTATGCAGTCAATCCAATAGTTCAAAACTTTACCTCTCAAACTAGCCAACATAGACATGTGGAAAGTAGCATAAGCTTGGAGGGTCTTTCAACTCCTCGTCTTGATGTAAATGGTTTGATGTCATCAGAGCATTTAAATGTTGCTGAAGGCTATGTAAATGACAAGGAATATTCTTCTGAATTGGGACTTAATCATCACACGGCAGAAGATGTAAAGATTAACTCCATAACAGAAGCAGGACCCAGCATTCCTCAAATTCTTCATATGGTATGCAGTGGGGCTGATGGAAGCCCTGTTTCAAGTAAACGGACTGCACTTCAACAATTAGTTGATGCTTCTATAACAAATGATCATTCTATTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTACTGGATGATTCAGATTCCTCAGTTAAAGAGCTTGCTCTTTCACTAATAGTTGAAATGCTTAAAAACCAGAAAGGCGCAATGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCACGTTACAAAAGATATCATTCCTAAGGTCTCCAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACACTTGTCATTTGCATAAATTGCTTAACAAAGCTTGTAGGGCGGCTTTCTCAGGAGGAACTAATGGCTCAGTTACCCTCGTTTCTGCCCGCACTTTTTGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGTAAGACCGTTGTTTTCTGCCTTGTGGATATTTATATAATGCTTGGGAAAGCATTCTTGCCATATTTACAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAACAATTGATGCCGTTCAAGATTAG 4338 0.4265 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALLPAIVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFAATELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGISGGYITGEIKHLSVNPKKSSPKAKSSSRETSLFGGEGDITEKPIDPVKVYSDKELIREIEKIASTLVPEKDWSIRIAAMQRVEGLVIGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEGCAEMFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVARVLPRIADSAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRLADLYEDMIKCCVKDAMSEVRSTARMCYRMFAKTWPERSRRLFASFDPAIQRLINEEDGGIHRRHASPSIRDRGGLTSLASQTSAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSFRSSSLDLGVDPPSSRDPPFPAAVSASNHLTSSLTTESTASGINKGSNRNGGLGLSDIITQIQASKDSAKLSYHSSVGIEPLSSISSYSSKRASERLHERSSLDDNIDIRETRRFMKPNHEKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEVPNYAEGPSSLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGVIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVLACRKPFEGYMERILPHVFSRLIDPKELVRQPCAATLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHSMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLVKDSLGQASFGETQEPLYQNFETDPNSGSLASKTKDLVYAVNPIVQNFTSQTSQHRHVESSISLEGLSTPRLDVNGLMSSEHLNVAEGYVNDKEYSSELGLNHHTAEDVKINSITEAGPSIPQILHMVCSGADGSPVSSKRTALQQLVDASITNDHSIWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKTIDAVQD* 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1747 1445 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Pvu1g1747 1445 MobiDBLite consensus disorder prediction 610 660 - -
Pvu1g1747 1445 MobiDBLite consensus disorder prediction 633 660 - -
Pvu1g1747 1445 PANTHER CLASP 28 1437 - -
Pvu1g1747 1445 Gene3D - 1226 1437 IPR011989 -
Pvu1g1747 1445 Gene3D - 1 221 IPR011989 -
Pvu1g1747 1445 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Pvu1g1747 1445 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Pvu1g1747 1445 PANTHER PROTEIN, PUTATIVE-RELATED 28 1437 - -
Pvu1g1747 1445 Gene3D - 796 1020 IPR011989 -
Pvu1g1747 1445 SUPERFAMILY ARM repeat 7 401 IPR016024 -
Pvu1g1747 1445 MobiDBLite consensus disorder prediction 503 533 - -
Pvu1g1747 1445 Pfam CLASP N terminal 284 500 IPR024395 -
Pvu1g1747 1445 Pfam CLASP N terminal 802 996 IPR024395 -
Pvu1g1747 1445 SUPERFAMILY ARM repeat 289 1435 IPR016024 -
Pvu1g1747 1445 Gene3D - 267 506 IPR011989 -
Pvu1g1747 1445 SMART TOG_3 3 224 IPR034085 -
Pvu1g1747 1445 SMART TOG_3 780 1029 IPR034085 -
Pvu1g1747 1445 SMART TOG_3 270 514 IPR034085 -
Pvu1g1747 1445 SMART TOG_3 1198 1437 IPR034085 -
Pvu1g1747 1445 MobiDBLite consensus disorder prediction 243 266 - -
Pvu1g1747 1445 MobiDBLite consensus disorder prediction 246 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1747 Pvu-Chr1 43073004 43085808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1747 K16578 - gmx:100796697 2596.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1747 1 43073004 43085808 Pvu1g1747 1 43073004 43085808 ECH
Pvu1g1747 1 43073004 43085808 Pvu7g1605 7 38009322 38026350 PCT