Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1554 ATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCTCCAAGTCCGAGGCAAGCGATCCCGTGCTTGCGCCGTACGCCGCCGCCAACCGCAACTCGGCAGCGGCGCCCTCGCCCAATGTCGTCGTCAACCACGCCTCGCGCGGAGCCGGAGGTGCCGCGCCTCCTAGCTCCGGCACCGCGATGCCGCTCGTGCCGACCCCCGGGGCCATGGAGCCTCTGCCTCCTTTTCGCGATGCGCCGGCCTCTGACCGGCAGAACCTCTTCCTCCGGAAGCTCCACGTCTGCTGCTACGTCCTTGACTTCTCCGACACGCTGAAGAACGTTAGAGAGAAGGAAATCAAGCGCCAAGCGCTGATGGACCTCGTCGACTTCATCCAATCTGGCTCCGGCAAGATGTCGGAGAATTGCCAGGAGGAGATGATCAGAATGATCTCCGTCAATATTTTCCGGTGCCTCCCTCCGGCGTCTCACGAGAACACCGGCCAGGAACCCACCGATCCTGAAGAGGAGGAACCAAGCTTGGATCCGACCTGGCCTCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTGGTTTCCTCCGATACGGATACGAAAATCGCAAAACGATATATTGACCACTCCTTTGTTCTCAAATTGCTTGATTTGTTTGATTCCGAGGACCCGCGGGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGACCGTTTATTAGAAAGGCTATTAACAACATTTTTTATCGGTTCATATATGAGACTGAGCGACACTCTGGTATTGGGGAGCTTCTGGAGATTCTTGGGAGCATTATTAATGGGTTTGCGCTGCCCATGAAGGAGGAGCACAAGTTGTTTCTGGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGGGCATGTACCACCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCAGATACGGTGATTAGGGGGTTGTTGAAGTATTGGCCTCTTACCAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTGGAGGAAGTGCTGGAGGCCACGCAGGCCGCCGAGTTTCAAAAATGCATGGTTCCGCTTTTTAGACAGATTTCACGCTGCCTCAATAGCTTTCACTTTCAGGTTGCCGAACGGACCCTGTTTTTGTGGAACAATGAGCATGTTGTGAGCTTAATTGCTCAAAACAGGACGGTGGTACTACCAATAATATTTGAAGCATTTGAGAAAAACATCTCGAGTCATTGGAATCAGGCAGTACATGGACTGACCGTGAATGTTCGGAAAATGTTCCTGGAAATGGATGCAGAATTGTATGAAGAGTGCCAGCGGCAGCACGCAGAGAAAGAGGCTAAAGCCCAAGATGTAGAAGAGCTGCGGGAACTTAATTGGAAGAGACTGGCAGATGCGGCTGCACAGAACGGAGTTGAGGACATGGTCACAACTTAG 1491 0.5205 MFKKIMKGGHKKPSKSEASDPVLAPYAAANRNSAAAPSPNVVVNHASRGAGGAAPPSSGTAMPLVPTPGAMEPLPPFRDAPASDRQNLFLRKLHVCCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKMSENCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPTWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPLTNCQKEVLFLGELEEVLEATQAAEFQKCMVPLFRQISRCLNSFHFQVAERTLFLWNNEHVVSLIAQNRTVVLPIIFEAFEKNISSHWNQAVHGLTVNVRKMFLEMDAELYEECQRQHAEKEAKAQDVEELRELNWKRLADAAAQNGVEDMVTT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1554 496 Coils Coil 453 473 - -
Pvu7g1554 496 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 490 - -
Pvu7g1554 496 PIRSF PP2A_B56 7 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu7g1554 496 MobiDBLite consensus disorder prediction 1 59 - -
Pvu7g1554 496 MobiDBLite consensus disorder prediction 156 175 - -
Pvu7g1554 496 Gene3D - 81 484 IPR011989 -
Pvu7g1554 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu7g1554 496 SUPERFAMILY ARM repeat 86 467 IPR016024 -
Pvu7g1554 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1554 Pvu-Chr7 37247703 37253705 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1554 K11584 - gmx:100795277 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1554 7 37247703 37253705 Pvu7g1554 7 37247703 37253705 ECH
Pvu1g1871 1 44508319 44515229 Pvu7g1554 7 37247703 37253705 PCT