LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g1549	ATGGAAGCAGAGACTTTGACTGCTAATCACCCTCCCAGTTTTCTTCACCGGTCGCTTCCTGCCGTTGTGCCTACCCTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGTGGCAATTGTTGAAGGAGGTGCACGATTCGGATTTGATCTGATGGCTTTCGCACTTATCTTCAATTTTGCAGCAATCTTCTGTCAATACATATCAGCGAAGATTGGTGTTATCACAGGGAAAGATCTTGCTCAGATTTGCAGTGATGAGTACGATAGCTGGACATGCATGCTTCTTGGAGTTCAAGCAGAACTTTCGGTGATCGTGCTAGACCTTAACTTGATATTGGGCATGGCACATGGATTAAATATTCTTTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTGCTACTGGCGCTGTTTTCCATCTCCTTCTTTTTGTCCTCCTTGACATTGAGAAGGCCAAGATCGTGGGCCTGTTTGTGTCAGGTTTTGTATTTCTTACATTTGTACTTGGAACACTCATTAATCAACCAGACATTCCATTATCCATTAATGGAATACTAACAAAGTTGAGTGGGGAGAGTGCATTTGTGCTGATGAGTCTCTTAGGAGCAACTCTTGTGCCTCACAACTTCTACCTTCATTCCTCTATTGTACAGTGGCATCAGGGATCAACTACTATTTCTAAGGATGCTCTATGTCATAACCATTTTTTGGCCATCATATGTGTATTCAGTGGCCTTTATTTGGTAAATAATGTGCTGATGAATGCTGGAGCAAATGAGTTCTACAGTATGGGTCTTGTTTTAACTACTTTTCAGGACGCATTATCTCCAATGGAACAGGTGTTACGTAGTCCAATAGCGATGCTTGCTTTTTTACTCATTCTGTTTTTCGCAAATCAAACAACAGCATTAACTTGGAGCTTTGGTGGAGAAGTAGTTGTGCATAGTTTCTTAAAATTGGACATTCCAGGTTGGCTTCATTATGCTACGATTAGAGTAATTGCCGTTTTGCCCGCCCTTTATTGTGTTTGGAGTTCCGGAGCTGAAGGGATGTATCAACTACTTATATTCACTCAGATTGTGGTAGCTTTGCAACTTCCATCTTCTGTGATCCCTCTTTTTCGGATCGCCTCATCTAGATCAATAATGGGGGTACACAAGATCCCTCAATTTGTGGAATTTTTGGCCTTGATCATATTTATTGGGATGCTTGTCTTGAATATTGTCTTTGTTGTAGAAATGATATTTGGTAGTAGTGATTGGGTGGGCAATTTGAGATGGAACGTGGGGAATGGTGTCTCTCTCTCTTATTTGGTTCTTCTTTGCACTGCTTTTGCATCATTCTGTTTGATGCTTTGGTTAGCTGCCACACCATTAAAATCTGCAAGTATTCAATTAGATGAAGCATGGAACTGGGGCATGCCACAGGCTATACCAGAACCCCGGATTGATAGTGAAGAAACAGATTTAAGTGAAAAAAGTTATCATGGAGATGCATCAGTTCAGGTGATGGAACCATCACCAGCTCTAACAAGGACCCTGGAATATTCAGAACTACCTGTTGCAAGTTTTCTTCATGAACTACCTGAAACTATTTTGGAGCCTGATGTTCCTGTGATTACGGTAAGGGAGACTCATTCATTTACATCATTTCCTTGCTCCCCAACACCTGTTGTTAAGGAATCAATTTCCACTTCAGAATCAGAGGCAGTGGCGGCTGCAAGTACTGAGACTTCTGGTATTAGATTGGTAGATGCCAAAACTTTAAAAACAGAAACTAGTGCCTCTGTGGAGAAAACTGTAGAAGATTCAATTGCCGAAAGGGATGATGATGATGGAGACTTATGGGAAACTGAAGAAATATCAAAAGTGGTCTCACTAGCCCCATCTTCAGCACCCGATGGCCCAGCATCATTCAGGAGTCTTAGTGGAAAAAGTGATGATGGAGGTAATAGCCTTGGAAGTCTTTCAAGATTAGCAGGTTTAGGGCGTGGTGCAAGACGTCAACTAGCTGCTATTCTTGACGAATTCTGGGGACAGCTTTATGATTTTCATGGTCAATTTACCCAGGAAGCTAAGGCTAAGAAACTTGATGTTTTACTGGGAGTGGATTCAAGACTCACTGGTTCTTTGCAGAAAATGGATACATGTGGAAAGGAATATCCTGAGAAATGGATATCTGCAGGAAGTATACCGGATAGTTTGATGAACTCTGCCTCATATGACTCTCCCAGGCAGCATAGGATGCAAAGTAATTTTGAGCCTTCCTATGGGCCTCGAAGGAGTTATTCCTCAGTGCGGACAAATCCCATGCAGTTTATGGATGAATATGTTCAGACCTCGAACCGCAATCTCCTCAGTGCTGGTGAAAGGCGTTATTCCAGTGTGCGCAATGTACCTACATCCAGGTCCTGGGATTATCAGCCAACTACTGTACATGGTTATCAGGTTGCATCATATATTAATCAGATTGGTAAAGAGACAAATTCTGATAACTTAAATGGTCTGATGGAATCCCCTTCCATGGGTATTATGAGCAACTACAGGAATTCTATTGGTAACACAAACAACAACTACCGGAATTCTATTGCACTTGCCATGGGGCAAAAGTTGCAAAATGGTTCAGGTTTAAGCCAACCCCCAGGCTTCCAGAACATTGCTGTCCCTAAGAATAGCCAATTGCCGTCTGAGAGGTCCTGCTATGGACCTGCGGATAATTCGGTCAGTTCAGTTAATGCTAAGAAGTACCACAGTTTGCCTGACATTTCAGGATATGCCATCCCTCACAGGGATGCTTACATATCTGATAAGAGTGCTCCATGGGATGGTTCTGTTGGTGGATATAGATCTTCTACGGGTAGGACTCATCATGAACAGTCATTATATTCAAATTCCGGATCAAGGGCAGGAGCTCCTTTAGCCTTCGATGTACTCTCTCCGTCAAAAGTTTACAGCAATGTACTTTCTTCCCAGTTGAGTTCTGGTTTGGGTACTGGATCCCTCTGGTCCAGACAACCTTTCGAGCAGTTTGGGGTGGATGATAGAGTTCATAGTGCTTCAACAGAAGATGTTGGAAATAGACGTAGTGCAATTACTCAAGAAACTACTTCGGTTGTGGATATAGATGGCAAGCTTCTTCAATCTTTTAGAAGTTGTATTTTGAAACTCTTAAAATTGGAAGGTTCTGATTGGCTGTTTAAACAGAATGATGGGGCTGATGAAGATCTGATTGACCGGGTTGCTGCAAGGGAGAAATTTTTCTCTGAAGTTGAAACCACAGAGATGAATCAAGCAAATGCTATGGGAGAAGCTCGGTATTTTTCTTCTGATGGGAAGACTTTTTCTTCAATGAAGAATAATGAGGCAAATTGGTCTAATTTTTCTGTGACCTCAATCCCCAACTGTGGGGAAGGATGTGTATGGAGAGCAGACATAGTTATAAGCTTTGGGGTGTGGTGTATCCACCGTGTTCTTGACCTCTCACTGATGGAGAGCCGACCAGAGCTGTGGGGCAAGTACACTTATGTACTCAATCGCTTGCAGGGTATAATTGATCTGGCTTTCTCCAAGCCTCGTTGTCCCATGACCGCATGCTTTTGCCTTCAAGTTCCCATGACGTATCAGATAAAGTCAAGCTCACCTCCTTCGAACGGGATGCTGCCCCCTGCTTCAAAACCAGGGCGCGGAAAATGCACAACTGCATCTGTGGTGTTTGAGATGGTGAAGGATGTGGAAATAGCAATCTCTAGCCGGAAAGGTCGTACAGGAACTGCTGCTGGTGATGTAGCCTTCCCAAAGGGAAAGGAGAATTTGGCATCTGTTCTCAAACGGTACAAGCGTAGATTATCCAACAAACCAGTTGGCACTCAAGAAGGGATTCGCAAGATTCCCACATCAGCACCATACAACTCTTAG	3921	0.4295	MEAETLTANHPPSFLHRSLPAVVPTLLISIGYVDPGKWVAIVEGGARFGFDLMAFALIFNFAAIFCQYISAKIGVITGKDLAQICSDEYDSWTCMLLGVQAELSVIVLDLNLILGMAHGLNILFGWDLFACVFLTATGAVFHLLLFVLLDIEKAKIVGLFVSGFVFLTFVLGTLINQPDIPLSINGILTKLSGESAFVLMSLLGATLVPHNFYLHSSIVQWHQGSTTISKDALCHNHFLAIICVFSGLYLVNNVLMNAGANEFYSMGLVLTTFQDALSPMEQVLRSPIAMLAFLLILFFANQTTALTWSFGGEVVVHSFLKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLIFTQIVVALQLPSSVIPLFRIASSRSIMGVHKIPQFVEFLALIIFIGMLVLNIVFVVEMIFGSSDWVGNLRWNVGNGVSLSYLVLLCTAFASFCLMLWLAATPLKSASIQLDEAWNWGMPQAIPEPRIDSEETDLSEKSYHGDASVQVMEPSPALTRTLEYSELPVASFLHELPETILEPDVPVITVRETHSFTSFPCSPTPVVKESISTSESEAVAAASTETSGIRLVDAKTLKTETSASVEKTVEDSIAERDDDDGDLWETEEISKVVSLAPSSAPDGPASFRSLSGKSDDGGNSLGSLSRLAGLGRGARRQLAAILDEFWGQLYDFHGQFTQEAKAKKLDVLLGVDSRLTGSLQKMDTCGKEYPEKWISAGSIPDSLMNSASYDSPRQHRMQSNFEPSYGPRRSYSSVRTNPMQFMDEYVQTSNRNLLSAGERRYSSVRNVPTSRSWDYQPTTVHGYQVASYINQIGKETNSDNLNGLMESPSMGIMSNYRNSIGNTNNNYRNSIALAMGQKLQNGSGLSQPPGFQNIAVPKNSQLPSERSCYGPADNSVSSVNAKKYHSLPDISGYAIPHRDAYISDKSAPWDGSVGGYRSSTGRTHHEQSLYSNSGSRAGAPLAFDVLSPSKVYSNVLSSQLSSGLGTGSLWSRQPFEQFGVDDRVHSASTEDVGNRRSAITQETTSVVDIDGKLLQSFRSCILKLLKLEGSDWLFKQNDGADEDLIDRVAAREKFFSEVETTEMNQANAMGEARYFSSDGKTFSSMKNNEANWSNFSVTSIPNCGEGCVWRADIVISFGVWCIHRVLDLSLMESRPELWGKYTYVLNRLQGIIDLAFSKPRCPMTACFCLQVPMTYQIKSSSPPSNGMLPPASKPGRGKCTTASVVFEMVKDVEIAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSNKPVGTQEGIRKIPTSAPYNS*	1307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g1549	1306	PIRSF	EIN2	1	1304	IPR017187	GO:0009873
	Pvu7g1549	1306	MobiDBLite	consensus disorder prediction	1285	1306	-	-
	Pvu7g1549	1306	Pfam	Natural resistance-associated macrophage protein	38	390	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PRINTS	Natural resistance-associated macrophage protein signature	97	123	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PRINTS	Natural resistance-associated macrophage protein signature	199	222	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PRINTS	Natural resistance-associated macrophage protein signature	301	320	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PRINTS	Natural resistance-associated macrophage protein signature	329	346	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PRINTS	Natural resistance-associated macrophage protein signature	361	380	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	14	1191	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Pvu7g1549	1306	MobiDBLite	consensus disorder prediction	742	766	-	-
	Pvu7g1549	1306	MobiDBLite	consensus disorder prediction	629	652	-	-
	Pvu7g1549	1306	PANTHER	ETHYLENE-INSENSITIVE PROTEIN 2	14	1191	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g1549	Pvu-Chr7	37134085	37142031	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g1549	1	1297	Miscellaneous Gene Families	AT5G03280	51.543	0.0	1231

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g1549	-		K14513	gmx:100801190	2193.31

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu7g1549	7	37134085	37142031	Pvu7g1549	7	37134085	37142031	ECH
	Pvu1g1839	1	44116445	44125962	Pvu7g1549	7	37134085	37142031	PCT