Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1493 ATGGCTGCAAAGGGCGAGAAGAAACCTGCGGAGAAAAAGCCTGCAGAGAAGGCTCCAGCTCCAGCGGAGAAAACTAAGGCGGAGAAGAAGATTCCAAAGGATGCTACCTCTGGAGAGAAGAAAAAGAAGAAGAAGGCAAAGAGTGTGGAGACCTACAAAATCTACATCTTCAAGGTACTTAAGCAAGTCCACCCTGACATTGGGATCTCCAGCAAGGCCATGGGAATCATGAACAGTTTCATCAATGATATTTTTGAGAAACTAGCTCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGTGAAATCCAGACTGCTGTCCGTCTTGTCCTCCCTGGCGAGCTCGCCAAGCATGCTGTCTCTGAAGGAACCAAGGCTGTTACCAAATTCACCAGCTCTTGA 420 0.4857 MAAKGEKKPAEKKPAEKAPAPAEKTKAEKKIPKDATSGEKKKKKKAKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1493 139 Pfam Core histone H2A/H2B/H3/H4 7 115 IPR007125 GO:0003677
Pvu7g1493 139 PANTHER HISTONE H2B 5 139 - -
Pvu7g1493 139 Gene3D Histone, subunit A 3 139 IPR009072 GO:0046982
Pvu7g1493 139 PANTHER HISTONE H2B 5 139 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 SUPERFAMILY Histone-fold 27 139 IPR009072 GO:0046982
Pvu7g1493 139 MobiDBLite consensus disorder prediction 1 48 - -
Pvu7g1493 139 ProSitePatterns Histone H2B signature. 107 129 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 SMART h2b3 42 138 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 PRINTS Histone H2B signature 52 70 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 PRINTS Histone H2B signature 71 91 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 PRINTS Histone H2B signature 93 110 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 PRINTS Histone H2B signature 110 123 IPR000558 GO:0000786|GO:0003677|GO:0030527
Pvu7g1493 139 PRINTS Histone H2B signature 123 136 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1493 Pvu-Chr7 35935408 35936126 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1493 K11252 - gmx:100305731 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1277 1 34537308 34544204 Pvu7g1493 7 35935408 35936126 ECH
Pvu7g1493 7 35935408 35936126 Pvu7g1493 7 35935408 35936126 ECH