Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1482 ATGTTGCCCCTTTCCCTTCTCAAGACTGCTCAAGGCCACCCAATGTTGGTGGAACTGAAAAATGGTGAGACTTATAACGGCCATCTGGTTAATTGCGATACATGGATGAACATCCATCTCAGAGAAGTCATCTGCACATCTAAAGATGGAGATAGATTTTGGCGTATGCCCGAGTGCTACATTCGTGGTAATACCATTAAGTACCTTCGGGTTCCTGATGAGTCCAGGAGAACAAAGAGCCGTACTGATCGCAAACCCCCTGGTGTGGGACGTGGGAGGGGAAGAGGTAGGGAGGATATCCCCGGAGGACGTCAACCAAAAGGAATTGGGCGTGGCCTTGATGAAGGTGGACCAAAAGGACAAGGAGGAGGTCGAGGCAGGGGTGGTCCGGGTGGAAAGCCAGGTGGAAACAGAGGGCGAGGTAGAGGTTAA 432 0.5139 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDESRRTKSRTDRKPPGVGRGRGRGREDIPGGRQPKGIGRGLDEGGPKGQGGGRGRGGPGGKPGGNRGRGRG* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1482 143 CDD LSm4 2 74 IPR034101 GO:0000398|GO:0000956
Pvu7g1482 143 Gene3D - 1 79 - -
Pvu7g1482 143 SUPERFAMILY Sm-like ribonucleoproteins 3 123 IPR010920 -
Pvu7g1482 143 PANTHER SM-LIKE PROTEIN LSM4 1 132 - -
Pvu7g1482 143 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 132 IPR027141 GO:0006396
Pvu7g1482 143 Pfam LSM domain 6 70 IPR001163 -
Pvu7g1482 143 MobiDBLite consensus disorder prediction 70 104 - -
Pvu7g1482 143 SMART Sm3 5 71 IPR001163 -
Pvu7g1482 143 MobiDBLite consensus disorder prediction 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1482 Pvu-Chr7 35662350 35664343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1482 K12623 - gmx:100500134 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1482 7 35662350 35664343 Pvu7g1482 7 35662350 35664343 ECH
Pvu7g1482 7 35662350 35664343 Pvu1g2135 1 47049659 47052520 PCT