Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1441 TATTCAGTCTATGATGTGACACGACGCGAGACATTTACGAATTTGATTGATATATGGGCTAAAGAAGTTGAGCTTTATTCTACTAATCATGACAGCATCAAAATTCTTGTTGGAAATAAGGTGGATAAGGAGAGTGAAAGAGCTGTAAGCAAAGAAGAGGGAATGGCTCTTGCACAGCAACATAGATGCTTGTTCCTAGAGTGTAGTGCTAAAACTAGAGCAAATGTTCAGCAATGCTTTAATGATCTCTCACTAAAGATATTAGATGTGCCAGGTTTAAGGGAAAAAGGGTCTGTTGCAGTGAGAAGGCAAAATCAAAAACACATGTATGGGACATCTCAAAGCGGTGGTTGCTGTTCTTAG 363 0.3912 YSVYDVTRRETFTNLIDIWAKEVELYSTNHDSIKILVGNKVDKESERAVSKEEGMALAQQHRCLFLECSAKTRANVQQCFNDLSLKILDVPGLREKGSVAVRRQNQKHMYGTSQSGGCCS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1441 120 ProSiteProfiles small GTPase Ras family profile. 1 120 IPR001806 GO:0003924|GO:0005525
Pvu7g1441 120 ProSiteProfiles small GTPase Rab1 family profile. 1 120 - -
Pvu7g1441 120 SMART ras_sub_4 1 90 - -
Pvu7g1441 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 95 IPR027417 -
Pvu7g1441 120 Pfam Ras family 3 87 IPR001806 GO:0003924|GO:0005525
Pvu7g1441 120 PANTHER DRAB5-RELATED 3 120 - -
Pvu7g1441 120 PRINTS Transforming protein P21 ras signature 30 43 - -
Pvu7g1441 120 PRINTS Transforming protein P21 ras signature 65 87 - -
Pvu7g1441 120 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 3 120 - -
Pvu7g1441 120 SMART rab_sub_5 1 90 - -
Pvu7g1441 120 Gene3D - 1 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1441 Pvu-Chr7 34520501 34521750 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1441 K07910 - gmx:100809867 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1878 1 44588002 44591438 Pvu7g1441 7 34520501 34521750 ECH
Pvu7g1441 7 34520501 34521750 Pvu7g1441 7 34520501 34521750 ECH