Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1164 ATGAGGCTACAACAACTCATTTTGTTCCTGTTGTTGCTCTTGGTCACCAAAGCAAACGGGTCTCTACTACCATTCATAGATCCTCCCAGAGGCGTTTTGGCTGAGCTCTTGTCGGATCGCTTCCCAGACCCGTTTCATGTGCTGGAACAAATTCCATTTGGGGTTGAGAAAGATGAACAATCGATGGTCATGTCACCTGCTAGAGTGGACTGGAAGGAGACCCCAGAGGGGCATGTAATGATGCTGGATGTGCCGGGGATGAAGAGAGAAGAGATAAAGATAGAAGTGGAAGAGAATAGGGTGCTGAGAGTGAGTGGTGAAAGGAAGAGAGAGGAGGAGAAGAAAGGGGATCACTGGCACAGAGTGGAGAGGTCCTATGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGACAGTGTGAAGGCTAAGCTGGAGAATGGGGTGCTCACTTTGACTCTTGACAAGTTGTCACCTGAAAAGATCAAAGGTCCCAGGGTGGTTAGCATTGCAGGGGAGGATCAGCAGCAAGCCAAGCTGAGCACAGATGGGGCCAAGCAGGAGCTCTGA 579 0.5026 MRLQQLILFLLLLLVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGVEKDEQSMVMSPARVDWKETPEGHVMMLDVPGMKREEIKIEVEENRVLRVSGERKREEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGEDQQQAKLSTDGAKQEL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1164 192 Gene3D - 31 175 IPR008978 -
Pvu7g1164 192 ProSiteProfiles CS domain profile. 64 171 IPR007052 -
Pvu7g1164 192 Pfam Hsp20/alpha crystallin family 70 173 IPR002068 -
Pvu7g1164 192 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 6 182 - -
Pvu7g1164 192 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 6 182 - -
Pvu7g1164 192 MobiDBLite consensus disorder prediction 172 192 - -
Pvu7g1164 192 CDD ACD_ScHsp26_like 68 159 - -
Pvu7g1164 192 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 58 176 IPR002068 -
Pvu7g1164 192 MobiDBLite consensus disorder prediction 177 192 - -
Pvu7g1164 192 SUPERFAMILY HSP20-like chaperones 61 170 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1164 Pvu-Chr7 15057898 15058905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1164 K13993 - gmx:100526965 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1369 4 40519471 40520031 Pvu7g1164 7 15057898 15058905 PCT