Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1369 ATGAGGCACTTGGTACTAGTACCACTGATCTTGCTTGTTCTTGCTGGTTTTCCATCCAAGGCAAAAGGGCATCTGCAACCATTTACTGATCGTCCTGGTGCACTCTGGGCTGACATATGGTCTGATCGTTTCCTTGATCCATTTCGTGTGTTAGAGCAAATCCCATTTGGGGTTGCCAAAGATCAGCCATCCATGGCTGTTTCACCTGCACGAGTAGATTGGAAGGAGACACCAGAGGGTCATGTTATAATGATAGATGTGCCAGGGTTGAAGAAAGATGAGATCAAGATAGAAGTGGAGGGGAACAGAGTGCTGAGAGTGAGTGGAGAAAGGAAGATGGAGGAGGAGAGGGAAGGGGATCACTGGCATAGAGTGGAGAGATCTTATGGCAAATTCTGGAGGCAGTTCAAGGTACCTGACAATGTGGATTTTGATTCTCTCAAGGCTAAGTTAGAGAATGGAGTGCTTACTCTCACAATGGCCAAGTTGTCACCTGATAAGATCAAAGTTCCAAGGGTTACTAGCATTGCAGGGGATGATGAAAGCAAGCAGGTGCTTTGA 561 0.4652 MRHLVLVPLILLVLAGFPSKAKGHLQPFTDRPGALWADIWSDRFLDPFRVLEQIPFGVAKDQPSMAVSPARVDWKETPEGHVIMIDVPGLKKDEIKIEVEGNRVLRVSGERKMEEEREGDHWHRVERSYGKFWRQFKVPDNVDFDSLKAKLENGVLTLTMAKLSPDKIKVPRVTSIAGDDESKQVL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1369 186 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 61 179 IPR002068 -
Pvu4g1369 186 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 181 - -
Pvu4g1369 186 CDD ACD_ScHsp26_like 71 162 - -
Pvu4g1369 186 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 9 181 - -
Pvu4g1369 186 SUPERFAMILY HSP20-like chaperones 59 173 IPR008978 -
Pvu4g1369 186 Gene3D - 32 174 IPR008978 -
Pvu4g1369 186 ProSiteProfiles CS domain profile. 67 174 IPR007052 -
Pvu4g1369 186 Pfam Hsp20/alpha crystallin family 73 173 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1369 Pvu-Chr4 40519471 40520031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1369 K13993 - gmx:547971 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1369 4 40519471 40520031 Pvu4g1369 4 40519471 40520031 ECH
Pvu4g1369 4 40519471 40520031 Pvu7g1164 7 15057898 15058905 PCT