Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1161 ATGACAACTGTCATAGAGAAACTGGGCATCAAGATTGAGAGAAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGAAATGGCCCAAATGGGGATGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAACTGAATCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTGGACAAGCACTATAATTTTGAATAA 297 0.4478 MTTVIEKLGIKIERNPPESKLTQLGVRKWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSTESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYNFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1161 98 SUPERFAMILY RmlC-like cupins 17 95 IPR011051 -
Pvu7g1161 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Pvu7g1161 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Pvu7g1161 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Pvu7g1161 98 CDD cupin_TM1112-like 29 97 - -
Pvu7g1161 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1161 Pvu-Chr7 15014365 15015350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1161 K06995 - gmx:100527470 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1359 4 40414283 40416336 Pvu7g1161 7 15014365 15015350 PCT