Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1359 ATGAGTAACTTCACCGAGAAATTGGGCATTAAGATTGAAAAGAACCCTCCAGAAGACAAGCTCACTCAACTTGGTGTTAGGCAATGGCCAAAATGGAGTTGCCCTCCGAGCAAATTCCCATGGACATATGAGTCTAAGGAGACTTGCTATCTCTTGGAAGGAAAAGTGAAGGTTACCCCAACTGGGGAAAATGAGTCAGTGGAAATTGCTGCTGGTGATTTTGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCAGTTGCAGTTGACAAGCACTATAACTTTGAATGA 297 0.4343 MSNFTEKLGIKIEKNPPEDKLTQLGVRQWPKWSCPPSKFPWTYESKETCYLLEGKVKVTPTGENESVEIAAGDFVVFPKGMSCTWDVSVAVDKHYNFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1359 98 PANTHER OS04G0445200 PROTEIN 4 98 - -
Pvu4g1359 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Pvu4g1359 98 SUPERFAMILY RmlC-like cupins 21 95 IPR011051 -
Pvu4g1359 98 PANTHER OS04G0445200 PROTEIN 4 98 - -
Pvu4g1359 98 CDD cupin_TM1112-like 29 97 - -
Pvu4g1359 98 Gene3D Jelly Rolls 1 97 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1359 Pvu-Chr4 40414283 40416336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1359 K06995 - gmx:100527331 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1359 4 40414283 40416336 Pvu4g1359 4 40414283 40416336 ECH
Pvu4g1359 4 40414283 40416336 Pvu7g1161 7 15014365 15015350 PCT