Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0759 ATGAAGATGTGTCCACGACATAGGAATTCTTTTGTGATTGGTGTGATCTCCTTAGTTCTGATATTGGGATCAGAAAATGTGAAGGTGGTGAATGGGGGAAGTGAATACGAAGCCATTAATTGCAGAAAGCACAGTGCAGTTTTGACAGATTTTGGAGGAGTTGGTGATGGCGTTAAATCCAACACCAAAGCCTTTCGAAATGCAATAAGAAATCTGAGTCAACATGCATCTGATGGGGGCGCACAACTCATCGTGCCACCCGGAAAATGGCTAACGGGACCCTTTAATCTCACAAGCCATTTCACTCTTTTTCTTCACAAAAATGCTATTATTCTTGCTTCTCAGGATGAATCAGAATGGCCTCATCTTCCTGCATTACCTTCTTATGGAAGAGGGAGAGATGCTCCTGCTGGAAGGTTCAGCAGTCTAATTTCTGGAACCCATCTCACTGATGTTGTAATTACAGGTGATAATGGTAAAATTGATGGACAAGGAGCTTATTGGTGGGAGAAGTTCCATAAGAAACAATTGAATCTCACCAGACCATACATGATTGAGCTCATGTACTCTGATCAAATCCAGATATCATCTCTCACTTTATTGAACTCCCCATCCTATTTTATCCATCCAATTTACAGCAGTAACATAATAATGCAAGGGCTTACCATCAATGCTCCCAGAGGCTCTCCCAACACAGATGGGATAGATCCAGATTCATGTAGAAATGTTAGGATTGAAGATTGCAAGATTGTTTCTGGTGATGATTGCATTTCGATAAAAAGTGGATGGGATGAGTATGGGATTAAAGTTGCAATGCCATCCGAACACATAGTGATTAGAAGGATTACTTGCAGTGAAATGTCTGGAGGAATCTCGGATGTTAGAGCTGAAGATCTCATTGCCATCAACACTGAATCAGCTGTTAGAATCAAAACAGCAGTTGGTAGAGGTGGATATGTGAAGGACATATTTGTGAGAAGAATGAACCTCACAACCATGAAATATGTGTTTTGGATGACTGGTTCTTATGGATCACACCCTGACCCTCACTATGATCCCAAAGCACTACCCAAAATTACTGGGATAAATTATGCAGACGTTGCTGCATCAGATGTCAAATATTCTGCCAGACTCGACGGAATTTCCAACGACCCTTTTACCAATATTTGCATTTCTAATGTCTCTATCCAATTGAATGAACAGCGAAAGAAGCTTCAATGGAATTGCACTAATGTTTCTGGAGTCACACGCAATGTCACTCCTCCTACTTGCGAGTTGTTGCCAGAGAAAGGGCCACTCCAGTGTCCTTTTCCAACTAACTCTCTGCCCATTGAATCCGTTAAGCTGAAGTCTTGTAACACTAAAGTCTTCTTCTAA 1377 0.4132 MKMCPRHRNSFVIGVISLVLILGSENVKVVNGGSEYEAINCRKHSAVLTDFGGVGDGVKSNTKAFRNAIRNLSQHASDGGAQLIVPPGKWLTGPFNLTSHFTLFLHKNAIILASQDESEWPHLPALPSYGRGRDAPAGRFSSLISGTHLTDVVITGDNGKIDGQGAYWWEKFHKKQLNLTRPYMIELMYSDQIQISSLTLLNSPSYFIHPIYSSNIIMQGLTINAPRGSPNTDGIDPDSCRNVRIEDCKIVSGDDCISIKSGWDEYGIKVAMPSEHIVIRRITCSEMSGGISDVRAEDLIAINTESAVRIKTAVGRGGYVKDIFVRRMNLTTMKYVFWMTGSYGSHPDPHYDPKALPKITGINYADVAASDVKYSARLDGISNDPFTNICISNVSIQLNEQRKKLQWNCTNVSGVTRNVTPPTCELLPEKGPLQCPFPTNSLPIESVKLKSCNTKVFF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0759 458 Pfam Glycosyl hydrolases family 28 141 413 IPR000743 GO:0004650|GO:0005975
Pvu7g0759 458 PANTHER PECTIN LYASE-RELATED 28 454 - -
Pvu7g0759 458 SUPERFAMILY Pectin lyase-like 42 434 IPR011050 -
Pvu7g0759 458 Gene3D - 28 420 IPR012334 -
Pvu7g0759 458 SMART pbh1 240 261 IPR006626 -
Pvu7g0759 458 SMART pbh1 213 239 IPR006626 -
Pvu7g0759 458 SMART pbh1 274 295 IPR006626 -
Pvu7g0759 458 PANTHER ENDO-POLYGALACTURONASE-LIKE PROTEIN 28 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0759 Pvu-Chr7 6804799 6807915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0759 35 452 Glycoside Hydrolase AT3G48950 64.977 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0759 - - gmx:100779166 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0759 7 6804799 6807915 Pvu7g0759 7 6804799 6807915 ECH
Pvu4g1158 4 35909441 35912267 Pvu7g0759 7 6804799 6807915 PCT