Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0750 ATGGACGCTCCCCTGCTGGTGAACGGCGAGGGGGCGAAGCTGCTGGCGGAGGACGGCGACTACGTGCCGGCGAGGAACTTCAAGACCGTTAAGGATGTGTTCTGGATCGAAACCAAGAGGATGTGGGTGATTGCGTTGCCCATTGTTTTCAACATATGGTGCCAATTCGGAGTAAACTCTGTCACCAGCATCTTCGTCGGACACCTCGGTGACATTGAGCTCTCTGCTATCTCTCTCATCAATTCCGTCATTGGCAGTTTCGCCTTTGGTTTCATGCTTGGGATGGGAAGTGCAACAGAGACGCTATGTGGACAAGCTTTCGGAGCTGGGCAGGTTAATATGCTTGGCATTTATATGCAACGCTCATGGGTGATTTTATCTGTGACCAGTATTTTGCTCTTGCCCATATACATTTTTGCTGCTCCAATTTTGAAGCTTCTTGGTCAACAGACAGATATAGCTGATCTTGCTGGGAATTTCTCTATTTTAGTAATTCCGCAATTTCTTTCGCTTGCCTTCAATTTTCCAACGCAAAAGTTCCTTCAATCTCAGAGTAAGGTTAACGTCATTGCGTGGATTGGGTTGGTGGCTTTAGTTCTGCACGTTGGGATGCTCTGGCTCTTAGTTTACACATTAGAGTTAGGCTTAACTGGTGCAGCTTTGGCATTTGATATCACGAGTTGGGGGATTACAGCGGCTCAACTTATTTATGTTGTGGTCTGGTGTAAGGATGGATGGACTGGATTGTCATGGTTGGCTTTTAAGGATATTTGGGCCTTTGTTAGGCTATCTCTTGCATCAGCTGTAATGCTTTGCCTTGAAGTTTGGTATATGATGAGTGTCATAGTTCTTGCTGGCCACCTTGATAATGCAGTGGTTGCTGTTGATTCTCTCTCTATATGCATGAATATCAATGGGTGGGAAGGCATGATCTTCATTGGAATAAATGCAGCTGTCAGTGTCAGAGTTTCCAATGAACTTGGGCTTGGACGTCCAAGAGCTGCCAAGTACTCTGTCTACGTGACAACCTTTCAGTCACTTCTCTTGGGAGTCTTTTTCATGGGTATTGTTTTGACGACCAGAAACTATTATGCCCTTATTTTTACTAACAGTCTGGTTTTGCAAGAGGCCGTTTCGAAGCTAGGAGTCCTCCTGGCTATTACAATGGTTCTGAACAGTGTTCAACCAGTGATTTCAGGTGTTGCTGTTGGAGGTGGGTGGCAGGCCCTGGTGGCCTACATCAACGTAGGCTGTTACTACTTATTTGGGCTTCCACTGGGGTTCCTTCTTGGTTATAAAGCGAATTTGGGGGTTGAGGGTCTTTGGGGTGGTATGATATGTGGAATTCTTCTACAGACCTTCCTGCTCATGTTCATACTTTACAAAACTAATTGGAAGAAAGAGGTGGAACAAACAAATGCTCGCATGCTGGTATGGGGTGGACAACAAATTGAGGTTGATAAAATTGCTGCTTCTGCATAA 1482 0.4548 MDAPLLVNGEGAKLLAEDGDYVPARNFKTVKDVFWIETKRMWVIALPIVFNIWCQFGVNSVTSIFVGHLGDIELSAISLINSVIGSFAFGFMLGMGSATETLCGQAFGAGQVNMLGIYMQRSWVILSVTSILLLPIYIFAAPILKLLGQQTDIADLAGNFSILVIPQFLSLAFNFPTQKFLQSQSKVNVIAWIGLVALVLHVGMLWLLVYTLELGLTGAALAFDITSWGITAAQLIYVVVWCKDGWTGLSWLAFKDIWAFVRLSLASAVMLCLEVWYMMSVIVLAGHLDNAVVAVDSLSICMNINGWEGMIFIGINAAVSVRVSNELGLGRPRAAKYSVYVTTFQSLLLGVFFMGIVLTTRNYYALIFTNSLVLQEAVSKLGVLLAITMVLNSVQPVISGVAVGGGWQALVAYINVGCYYLFGLPLGFLLGYKANLGVEGLWGGMICGILLQTFLLMFILYKTNWKKEVEQTNARMLVWGGQQIEVDKIAASA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0750 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 475 - -
Pvu7g0750 493 CDD MATE_eukaryotic 37 471 IPR045069 GO:0042910|GO:1990961
Pvu7g0750 493 PANTHER PROTEIN DETOXIFICATION 13 475 - -
Pvu7g0750 493 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0750 493 Pfam MatE 47 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu7g0750 493 TIGRFAM matE: MATE efflux family protein 47 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0750 Pvu-Chr7 6693535 6697334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0750 K03327 - gmx:100799559 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0750 7 6693535 6697334 Pvu7g0750 7 6693535 6697334 ECH
Pvu4g1170 4 36310909 36313382 Pvu7g0750 7 6693535 6697334 PCT