Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0460 ATGAAGCTTCCGAGATCTTCGTTCTGCGTCTTTTTAGGGTTTTTGGTACTGTTTCTTTCGCCGCCGTCAATGGCGAAATTCGTGGTGGAGAAGAACAGCTTGACGGTGACGTCGCCGGACAACATCAAGGGCACGCACGATAGCGCGATTGGGAACTTCGGGATACCTCAATACGGAGGCAGCATGGCTGGGAACGTGGTGTACCCTAAGGAAAACCAAAAGGGTTGCAAGGAGTTCGATGACTCTGGGATTTCCTTCAAATCTAAACCTGGTGCTCTTCCCACTGTCGTTTTGCTCGATCGAGGAAATTGCTTCTTTGCTTTGAAGGTCTGGAATGCACAAAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGACATCGAGGAAAAGTTGATAACCATGGACACTCCTGAAGAGGATGGGTCTTCTGCAAAATACATAGAGAACATAACTATACCATCTGCTCTGATTGAAAAAAGTTTTGGTGGAAAGTTAAAGGATGCCATAAGTAATGGGGATATGGTCAATGTAAATCTGGATTGGAGAGAGGCTGTCCCCCACCCAGATGATCGTGTGGAGTATGAACTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAAGATTTTAAGGGTGCAGCGCAGATATTGGAGAAAGGTGGTTATACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCCCAAGCATTCACATTGAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGGAGATATTGTGCTCCAGATCCTGAGCAGGATTTCAGTACTGGATATGATGGAAAGGACGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGATTATGTCACTGATTTTCAAATTAGATGTCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGCCTTGATATTAAAAAGATTGAAAAGTGCATGGGAGATCCAAATAATGATTCTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTTGGAAAGGGATCACGAGGTGATGTTACCATATTGCCTACTCTAGTTGTCAACAATAGACAGTATCGAGGAAAGTTAGAGAAAGGTGCTGTTATGAAAGCTATTTGTGCTGGTTTTGAAGAAACTACGGAACCTGCTGTTTGTTTGAGCAGTGATGTGGAGACAAATGAGTGCTTGGCGAATAATGGTGGTTGTTGGCAGGATAAACCAGCTAACATCACCGCTTGCAAGGATACGTTCCGTGGGAGAGTATGTGAATGCCCCTTGGTGGATGGTGTGCAGTTCAAAGGAGATGGTTATACAACATGTGCAGCTAGTGGACCTGGGCGGTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCTCGGAATGGACATGCATATTCTGCTTGTTTGGATGATGGAGGGGTTAAATGTAAGTGTCCTGCAGGCTTTAAAGGGGATGGTGTCAAAAATTGTGAAGACATTGATGAATGCAGAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATGACTGCACTTGCAGTGGAGATCTTTTGTATATAAGAGACCACGATACTTGCATAAGTAAAACTGCGAGTCAGGAGGGAAGATCAGCTTGGGCTGCTTTTTGGGTTATTTTAGTTGGCTTAGTTGTGGCTGCTGGTGGGGCATACCTCGTGTACAAATATAGAATAAGGTCGTACATGGATTCCGAGATCAGAGCCATCATGGCACAGTATATGCCCTTGGACAGCCAATCAGAGGTTGTAAATCATGCGAACGATGAAAGAGCGTGA 1893 0.4411 MKLPRSSFCVFLGFLVLFLSPPSMAKFVVEKNSLTVTSPDNIKGTHDSAIGNFGIPQYGGSMAGNVVYPKENQKGCKEFDDSGISFKSKPGALPTVVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGGKLKDAISNGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIEKCMGDPNNDSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAVCLSSDVETNECLANNGGCWQDKPANITACKDTFRGRVCECPLVDGVQFKGDGYTTCAASGPGRCKINNGGCWHEARNGHAYSACLDDGGVKCKCPAGFKGDGVKNCEDIDECREKKACQCPECSCKNTWGSYDCTCSGDLLYIRDHDTCISKTASQEGRSAWAAFWVILVGLVVAAGGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHANDERA* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0460 630 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 16 609 - -
Pvu7g0460 630 Gene3D Laminin 472 552 - -
Pvu7g0460 630 SMART egfca_6 518 560 IPR001881 GO:0005509
Pvu7g0460 630 Pfam PA domain 63 162 IPR003137 -
Pvu7g0460 630 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 609 - -
Pvu7g0460 630 CDD PA_VSR 52 179 - -
Pvu7g0460 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Pvu7g0460 630 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
Pvu7g0460 630 SUPERFAMILY PA domain 32 148 IPR046450 -
Pvu7g0460 630 CDD EGF_CA 518 546 - -
Pvu7g0460 630 Gene3D Laminin 411 467 - -
Pvu7g0460 630 Gene3D - 24 188 - -
Pvu7g0460 630 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0460 Pvu-Chr7 3576541 3582443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0460 25 630 Miscellaneous Gene Families AT2G14740 84.488 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0460 - - gmx:100803958 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0460 7 3576541 3582443 Pvu7g0460 7 3576541 3582443 ECH
Pvu2g0536 2 4789398 4793847 Pvu7g0460 7 3576541 3582443 PCT