Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0090 ATGTTTTCACTCCCACGAAAAAACGAGTATCTTATCGATAAATTTTATAGGAAAAAAAAGAAGACAGAAAAGTATAGAAAGGACAAGAAAAAGAAAAGTCGAAAATGTATTCCTCTGAATGTGCGTGTTTCTCTGAACTTTCCTCTGTCAATTTGTTGCTTCACTTTCCTTTCCTTTCCTTTCCGATTCTCCATATCTCATAACAATCCAAAGCCAACTTATTCTCTTACTCCCTTCACTTCCACTCTCTCCTCTTCTCCTTCTTCCACAACATCCATGGCCTCTCACCAACCAGGAACCGGAGCTGACGGGCAAGGAGAAAAGGGCCCTCCGCCGCCGATCCCAGCAACGGCCTCTCAGAATCCGCTTTCTGAGATATCGCCATCGCCGTCGCCGTCGCCGTCTTCCTCGACGGCGCCGGCGCTGGTGCTGTCGAACTCGGGGAAGCGCATCGACCAGGCGGGGAAGAAGTACGTGAAGCAGGTGACGGGGCGGCACAACGACACGGAGCTGCACCTGGCGGCGCAGAGGGGCGACGTCGGCGCGGTGAGGCAGATTCTTCTCGACGTCGATTCTCAGGTCATGGGAACTCTCGGAGACGACGACGATCTCGACACCGAGATTGCGGAGGTGCGAGCTTGCCTCGTCAACGAAGAGAACGAGCTCGGTGAGACCCCCTTGTTCACTGCCGCCGAAAAGGGTCATCTCCATGTCGTGAAGGAACTTCTCAACCATTCCACCGCTCAGACTGTTTCCAAGAAGAACCGATCTGGATTTGATCCCTTGCATATTGCGGCTAGTCAAGGCCACCACCCCATTGTTCAGGTTTTGCTAGATTATGACCCGGGATTGAGCAAAACTATTGGTCCATCCAATTCGACTCCACTTATAACTGCAGCGACAAGAGGACACACGGAAGTGGTGAATGAGCTGCTGTCGAAGGATTGTAGCTTGTTGGAGATTGCTAGATCCAATGGCAAAAATGCATTGCATTTAGCAGCTCGTCAGGGTCATGTGGAGATTGTGAAAGCCTTGCTCAGTAAAGATCCGCAGTTGGCTCGGAGGACTGACAGGAAAGGGCAAACTGCATTGCATATGGCTGTAAAAGGGCAGAGTTGTGATGTGGTAAAATTACTTCTTGATGCGGATGCTGCTATTGTTATGCTTCCTGACAAATTTGGTAACACGGCACTACACGTGGCAACCAGGAAAAAACGAGTAGAGATAGTGAATGAGTTATTACATCTGCCAGACACCAATGTCAATGCATTAACCAGAGACCACAAAACAGCTCTTGACATTGCTGAAAGCCTTCCTCTCTCTGAAGAGGCATCAGATATAAAGGAATGTCTTTCTCGATATGGAGCACTTAGAGCTAACGAGCTCAACCAACCAAGGGATGAACTGAGGAAAACTGTTACTCAAATCAAGAAAGATGTTCACACTCAACTTGAACAAACCAAAAGAACGAACAAAAATGTTCATAATATTTCCAAAGAGTTAAGGAAACTCCACAGGGAAGGAATCAACAATGCCACTCAGTCAGTAACAGTGGTGGCGGTGCTGTTTGCTACAGTTGCTTTTGCTGCTATATTCACCGTGCCTGGCGGTGATAACGATGATGGCTCAGCTGTGGTAGCAGCTCATGCTGCTTTTAAAATCTTCTTCATCTTCAATGCTATTGCACTTTTTACATCTTTGGCTGTTGTGGTTGTTCAAATCACCTTGGTTAGAGGTGAAACTAAGGCAGAGAAAAGGGTGGTGGAGGTAATCAACAAGCTCATGTGGCTGGCTTCTGTCTGTACTTCGGTGGCATTTATTGCTTCTTCTTACATTGTTGTGGGTAGGAAGAACAAGTGGGCTGCTATTCTTGTTACAGTAGTTGGAGGGGTGATAATATCTGGAGTTATTGGCACCATGACTTTCTATGTGGTGAGGTCTAAGAGAAGCAGGTCAATGAGGAAGAAGGAGAAGCAGCTAGCCAGAAGAAGTGGATCTAACTCATGGCATCATTCTGAATTCTCCAACTCTGAGGTTGATCGGATTTATGCAATTTGA 2058 0.4718 MFSLPRKNEYLIDKFYRKKKKTEKYRKDKKKKSRKCIPLNVRVSLNFPLSICCFTFLSFPFRFSISHNNPKPTYSLTPFTSTLSSSPSSTTSMASHQPGTGADGQGEKGPPPPIPATASQNPLSEISPSPSPSPSSSTAPALVLSNSGKRIDQAGKKYVKQVTGRHNDTELHLAAQRGDVGAVRQILLDVDSQVMGTLGDDDDLDTEIAEVRACLVNEENELGETPLFTAAEKGHLHVVKELLNHSTAQTVSKKNRSGFDPLHIAASQGHHPIVQVLLDYDPGLSKTIGPSNSTPLITAATRGHTEVVNELLSKDCSLLEIARSNGKNALHLAARQGHVEIVKALLSKDPQLARRTDRKGQTALHMAVKGQSCDVVKLLLDADAAIVMLPDKFGNTALHVATRKKRVEIVNELLHLPDTNVNALTRDHKTALDIAESLPLSEEASDIKECLSRYGALRANELNQPRDELRKTVTQIKKDVHTQLEQTKRTNKNVHNISKELRKLHREGINNATQSVTVVAVLFATVAFAAIFTVPGGDNDDGSAVVAAHAAFKIFFIFNAIALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASVCTSVAFIASSYIVVGRKNKWAAILVTVVGGVIISGVIGTMTFYVVRSKRSRSMRKKEKQLARRSGSNSWHHSEFSNSEVDRIYAI* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0090 685 Gene3D - 145 281 IPR036770 -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat region circular profile. 359 386 - -
Pvu7g0090 685 MobiDBLite consensus disorder prediction 79 99 - -
Pvu7g0090 685 PANTHER CASKIN 130 680 - -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat region circular profile. 222 246 - -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat region circular profile. 257 279 - -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat profile. 359 391 IPR002110 GO:0005515
Pvu7g0090 685 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 130 680 - -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat region circular profile. 325 348 - -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat profile. 257 279 IPR002110 GO:0005515
Pvu7g0090 685 MobiDBLite consensus disorder prediction 79 147 - -
Pvu7g0090 685 SUPERFAMILY Ankyrin repeat 171 439 IPR036770 -
Pvu7g0090 685 SMART ANK_2a 222 251 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 291 320 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 325 354 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 359 388 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 257 286 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 393 423 IPR002110 GO:0005515
Pvu7g0090 685 SMART ANK_2a 166 195 IPR002110 GO:0005515
Pvu7g0090 685 Pfam Ankyrin repeats (3 copies) 291 350 IPR002110 GO:0005515
Pvu7g0090 685 Pfam Ankyrin repeats (3 copies) 171 283 IPR002110 GO:0005515
Pvu7g0090 685 Pfam Ankyrin repeats (3 copies) 357 422 IPR002110 GO:0005515
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat profile. 325 357 IPR002110 GO:0005515
Pvu7g0090 685 Pfam Domain of unknown function 507 613 IPR026961 -
Pvu7g0090 685 Gene3D - 282 489 IPR036770 -
Pvu7g0090 685 ProSiteProfiles Ankyrin repeat profile. 222 254 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0090 Pvu-Chr7 625748 630248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0090 107 685 Miscellaneous Gene Families AT3G12360 79.690 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0090 - - pvu:PHAVU_007G008900g 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1780 1 43516659 43520184 Pvu7g0090 7 625748 630248 ECH
Pvu7g0090 7 625748 630248 Pvu7g0090 7 625748 630248 ECH