Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0065 ATGAGTTCCACCACTACACTGAGGAAGCTAGAGGTTGTGTCCCCTGTTCCTGCGGACATAGACATTGCTAACTCCGTTGAACCTGTTCACATATCCCAGATTGCCAAAGACCTCAACCTCACTCCCAATCACTATGATCTTTACGGTAAATACAAGGCCAAGGTTTTGTTGTCAGTTCTTGATGAGCTTGAAGGATCACAAGATGGGTATTATGTGGTTGTGGGAGGTATTACTCCAACTCCTCTTGGGGAAGGGAAATCTACTACCACAGTTGGGCTCTGTCAAGCTTTAGGTGCTTTTCTTGATAAAAAGGTAGTCACCTGCGTTCGTCAACCATCACAAGGACCTACTTTTGGCATTAAAGGAGGAGCAGCTGGTGGTGGCTATAGCCAAGTTATCCCCATGGATGAATTCAATCTTCATCTAACAGGAGATATTCATGCAATAACTGCAGCAAACAATCTTCTAGCTGCTGCAATTGATACCCGAATTTTCCATGAGTCTACGCAGTCGGATAAGGCTCTTTTTAACAGACTTTGCCCTCCAAATAAAGAAGGGAAAAGGAGCTTCAGTGATGTCATGTTCAGGCGTCTTAAGAAGCTTGGCATTTCAAAGACCAACCCAGATGATCTTACACCAGAAGAAGTAAATAAATTTGCTAGGCTTGATATTGACCCAGATTCAATTACATGGAGGAGAGTAATGGACATCAATGACAGATTCTTGAGAAAAATTAGTATTGGCCAGGGACCAGATGAGAAAGGAATGGTAAGAGAAACAGCATTTGATATTTCAGTTGCTAGTGAGATAATGGCTGTTTTGGCACTGACAACATCCTTAGCTGATATGAGAGAGCGACTTGGGAAAATGGTTGTTGGAAATAGCAAGAGTGGTGACCCTGTCACTGCTGATGATCTAGGTGTTGGAGGTGCCTTAACAGTTTTGATGAAGGATGCCATTCACCCTACCCTTATGCAGACCCTGGAAGGAACTCCTGTTCTTGTTCATGCAGGTCCATTTGCAAATATTGCTCATGGGAATTCTTCCATTGTGGCTGATAAGATTGCACTGAAGTTGGTTGGACCAGGTGGATTTGTAGTTACTGAAGCTGGTTTTGGTGCTGATATTGGAGCAGAAAAGTTTATGAACATCAAGTGTCGTTATAGTGGTTTGACACCTCAATGTGCAATTATTGTGGCAACAATAAGGGCACTCAAAATGCATGGTGGAGGGCCTGCTGTTGTTGCTGGAAAACCTCTTGATCATGCATATTTGACTGAAAATGTTGGCCTTGTTGAGGCTGGTTGTGTGAATATGGCACGACATATATCAAATACAAAATCTTACGGTGTAAATGTTGTAGTTGCTATCAACATGTTTTCAACTGACACTGAAGCCGAGCTAAATGCGGTTCGGAGTGCTGCTTTAGCCGCCGGAGCTTATGATGCTGTAATTTGCACCCATCACGCCCATGGTGGCAAAGGAGCTGTTGACCTGGGAATTGCAGTTCAAAAAGCTTGTGAGAATGTGACACAGCCATTGAAGTTCCTGTATCCTCTGGATCTGAGTATAAAAGAGAAAATAGAGGCAATAGCAAAATCATATGGAGCCAGTGGCGTTGAGTATTCTGAGCAGGCCGAGAAGAAGATTGAGATGTATAGCAAGCAAGGATTTTCTGGTCTTCCAATCTGCATGGCTAAGACTCAGTATTCTTTCTCAGACAATGCTGCAGCAAAGGGAGCTCCAAGTGGGTTTGTCTTACCCATAAGGGATGTAAGAGCTAGTATAGGTGCTGGATTTATTTACCCTTTAGTTGGAACAATGAGTACAATGCCAGGGCTTCCAACAAGGCCATGCTTCTATGACATTGATATTGATACAACAACTGGAAAAGTCACTGGTCTCTCTTAA 1911 0.4317 MSSTTTLRKLEVVSPVPADIDIANSVEPVHISQIAKDLNLTPNHYDLYGKYKAKVLLSVLDELEGSQDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCVRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALFNRLCPPNKEGKRSFSDVMFRRLKKLGISKTNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKISIGQGPDEKGMVRETAFDISVASEIMAVLALTTSLADMRERLGKMVVGNSKSGDPVTADDLGVGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHAYLTENVGLVEAGCVNMARHISNTKSYGVNVVVAINMFSTDTEAELNAVRSAALAAGAYDAVICTHHAHGGKGAVDLGIAVQKACENVTQPLKFLYPLDLSIKEKIEAIAKSYGASGVEYSEQAEKKIEMYSKQGFSGLPICMAKTQYSFSDNAAAKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIDIDTTTGKVTGLS* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0065 636 ProSitePatterns Formate--tetrahydrofolate ligase signature 2. 399 410 IPR020628 GO:0005524
Pvu7g0065 636 Hamap Formate--tetrahydrofolate ligase [fhs]. 16 636 IPR000559 GO:0004329|GO:0005524
Pvu7g0065 636 Gene3D Formyltetrahydrofolate synthetase, domain 3 523 611 - -
Pvu7g0065 636 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 9 629 - -
Pvu7g0065 636 Pfam Formate--tetrahydrofolate ligase 18 636 IPR000559 GO:0004329|GO:0005524
Pvu7g0065 636 PANTHER MONOFUNCTIONAL C1-TETRAHYDROFOLATE SYNTHASE, MITOCHONDRIAL 9 629 - -
Pvu7g0065 636 Gene3D - 270 522 IPR027417 -
Pvu7g0065 636 Gene3D - 15 166 IPR027417 -
Pvu7g0065 636 ProSitePatterns Formate--tetrahydrofolate ligase signature 1. 119 129 IPR020628 GO:0005524
Pvu7g0065 636 Gene3D - 167 232 - -
Pvu7g0065 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 633 IPR027417 -
Pvu7g0065 636 CDD FTHFS 31 635 IPR000559 GO:0004329|GO:0005524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0065 K01938 - gmx:100806844 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0065 7 460658 465371 Pvu7g0065 7 460658 465371 ECH
Pvu7g0065 7 460658 465371 Pvu5g0389 5 3644024 3646915 ECH