Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0389 ATGATTCCAATAAAGAGAAGACAAAGAGGTGCTCCAGCCACAATGCACTCAGTTGGTCCTCAAGTTCATCCTAGTGGGCAAGATGAAGACTACAATCTGAGGGAGACCGATCCACAGCTCGGGGGGGAGCGGTGGCCAAATGCCAGAAGAGGGTGGATGACTGGTGGTGAAAGATTCACAAGCACACATGACCTTGTTGAGCAGATGTTCTATCTGTATGTTCGGGTAGTGAAAGCCAAGGATCTTCACCGCAGCACTCTTTCCTCAAGCTGTGATCCTTACGTGGAAGTGAAGCTGGGGAACTACAAAGGGAGAACAAAGCACATAGAGAATAAAACAAACCCAGAATGGAACCAAGTCTACGCTTTCTCCAAAGACAGAATTCAATCTTCTGTTTTGGAAGTCCTAGTGAAAGACAAAGAAATGTTGGGAAGAGATGATTGTATTGGAAGGGTGGCATTTGATCTCAACGAGGTTCCAACCAGAGTTCCCCCGGATAGTCCACTGGCTCCTCAGTGGTACAGACTCGAGGACCGGCGAGGAGGTGACATCATGCTTGCAGTGTGGATGGGAACTCAAGCTGATGAGGCCTTCTCAGAGGCTTGGCATTCTGATGCTGCCACTGTGTACGGAGAGGGTGTTTTCAATGCCAGATCAAAGGTTTATTTGTCACCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCACAAGATGTGATACCAAGTGACAGAAACCGGCTGCCAGAGGTTTTTGTCAAGGCGCAGATGGGGAGCCAGGTGTTGAAGACCAAGATATGTCCAACTAGGACAACCACACCACTTTGGAATGAAGATTTGGTCTTTGTGGCGGCTGAACCATTTGAGGAGAAGTTGACAATCACTGTGGAGGATCGCGTGCACCCTTCAAAAGATGAAGTACTTGGGAAGATGATCTTGCCACTGACCCTCTTTGAGAAGCGGCTCGACCACAGGCCAGTTCATTCGCGCTGGTTCAATCTTGAGAAGTTTGGTTTTGGAATGATGGAAGCTGATAGGAGAAATGAGCTTAAATTTTCAAGCAGGATTCACCTAAGAATTAGCCTTGAAGGTGGATACCACGTCCTTGATGAGTCCACTTTGTACTCAAGTGACCAAAGACCAACAGCTAGACAGCTATGGAAGCAGCCTATTGGGGTACTTGAAGTAGGCATCTTAGGAGCACAAGGACTCCTCCCAATGAAGATGAGGGATGGCCATGGCAGCACAGATGCATACTGTGTTGCCAAGTACGGTCAAAAATGGGTCAGAACCAGAACAATTGTTGACACTCATAGTCCAAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCTCTGTAATAACACTTGGTGTTTTTGACAACTGCCATTTAGGTGGGGGCGAAAAAGCCCCTGCAGGCACTGCGGCCAGGGATTCAAGAATTGGAAAGGTAAGAATTAGACTCTCAACACTTGAAGCTCAAAGGATATACACTCATAGTTACCCACTTCTTGTTTTGCACACACATGGTGTTAAGAAAATGGGTGAGCTTCAGCTAGCCGTGAGGTTCACTAGCCTCTCACTGGCTAACATGATTTACATTTATGGCCAACCCTTGCTTCCAAAGATGCATTACTTGCGCCCTTTCACAGTTAACCAAATAGAGAGTTTGAGGTACCAAGCCATGAACATTGTGGCCGGGAGGCTTGGAAGAGCTGAACCTCCCCTCAGAAAGGAGGTGGTGGAGTACATGTTGGATGTTGATTCCAATATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCTTCCGCATCATGTCACTTTTCTCTGGCATCATCACAATGGGGCAGTGGTTTAGCCAAGTTTGCAATTGGAAGAGCCCCATCACATCCGTCCTAGTTCACATTCTCTTCCTAATACTAATTTGCTACCCTGAACTGATACTTCCAACTTTGTTTCTCTACATGTTCTTGATTGGCCTGTGGAACTATAGGTTTAGGCCAAGAAACCCACCCCACATGGACACAAAACTGTCATGGGCAGAAGCAGTTCACCCTGATGAACTTGATGAAGAGTTTGACACATTCCCAACTTCTAGACCACATGATGTGGTGAGAATGAGGTATGACAAACTTAGAAGTGTTGCAGGAAGGATCCAAACAGTTGTTGCAGACATAGCAACGCAGGGAGAGAGGCTTCATTCTCTACTGAGTTGGAGAGACACCAGAGCCACCAGCCTCTTCGTAGTCTTCAGTTTGTGTTCAGCTGTGGTTCTGTATGCAACACCACCAAAAGTGGTAGCTATGGTAACAGGTGTGTATTATCTAAGGCATCCAAAGTTTCGCAGCAAACTTCCTTCTGTACCCATCAACTTCTTCAAGAGGCTTCCAGCTAGAACAGATAGCATGTTGTGA 2421 0.4647 MIPIKRRQRGAPATMHSVGPQVHPSGQDEDYNLRETDPQLGGERWPNARRGWMTGGERFTSTHDLVEQMFYLYVRVVKAKDLHRSTLSSSCDPYVEVKLGNYKGRTKHIENKTNPEWNQVYAFSKDRIQSSVLEVLVKDKEMLGRDDCIGRVAFDLNEVPTRVPPDSPLAPQWYRLEDRRGGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNARSKVYLSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQMGSQVLKTKICPTRTTTPLWNEDLVFVAAEPFEEKLTITVEDRVHPSKDEVLGKMILPLTLFEKRLDHRPVHSRWFNLEKFGFGMMEADRRNELKFSSRIHLRISLEGGYHVLDESTLYSSDQRPTARQLWKQPIGVLEVGILGAQGLLPMKMRDGHGSTDAYCVAKYGQKWVRTRTIVDTHSPKWNEQYTWEVYDPCSVITLGVFDNCHLGGGEKAPAGTAARDSRIGKVRIRLSTLEAQRIYTHSYPLLVLHTHGVKKMGELQLAVRFTSLSLANMIYIYGQPLLPKMHYLRPFTVNQIESLRYQAMNIVAGRLGRAEPPLRKEVVEYMLDVDSNMWSMRRSKANFFRIMSLFSGIITMGQWFSQVCNWKSPITSVLVHILFLILICYPELILPTLFLYMFLIGLWNYRFRPRNPPHMDTKLSWAEAVHPDELDEEFDTFPTSRPHDVVRMRYDKLRSVAGRIQTVVADIATQGERLHSLLSWRDTRATSLFVVFSLCSAVVLYATPPKVVAMVTGVYYLRHPKFRSKLPSVPINFFKRLPARTDSML* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0389 806 Pfam Plant phosphoribosyltransferase C-terminal 651 806 IPR013583 -
Pvu5g0389 806 MobiDBLite consensus disorder prediction 1 47 - -
Pvu5g0389 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 206 IPR035892 -
Pvu5g0389 806 ProSiteProfiles C2 domain profile. 375 504 IPR000008 -
Pvu5g0389 806 ProSiteProfiles C2 domain profile. 53 174 IPR000008 -
Pvu5g0389 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 383 IPR035892 -
Pvu5g0389 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 392 528 IPR035892 -
Pvu5g0389 806 Pfam C2 domain 228 334 IPR000008 -
Pvu5g0389 806 Pfam C2 domain 71 174 IPR000008 -
Pvu5g0389 806 Pfam C2 domain 392 506 IPR000008 -
Pvu5g0389 806 CDD C2C_MCTP_PRT_plant 229 381 - -
Pvu5g0389 806 SMART C2_3c 71 168 IPR000008 -
Pvu5g0389 806 SMART C2_3c 393 503 IPR000008 -
Pvu5g0389 806 SMART C2_3c 229 329 IPR000008 -
Pvu5g0389 806 ProSiteProfiles C2 domain profile. 209 332 IPR000008 -
Pvu5g0389 806 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 21 806 - -
Pvu5g0389 806 CDD C2B_MCTP_PRT_plant 71 192 - -
Pvu5g0389 806 CDD C2D_MCTP_PRT_plant 393 523 - -
Pvu5g0389 806 Gene3D C2 domain 59 191 IPR035892 -
Pvu5g0389 806 Gene3D C2 domain 374 530 IPR035892 -
Pvu5g0389 806 Gene3D C2 domain 216 363 IPR035892 -
Pvu5g0389 806 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 21 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0389 Pvu-Chr5 3644024 3646915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0389 29 806 Lipid Metabolism Gene Families AT5G06850 73.316 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0389 - - gmx:100785340 1537.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1459 1 38840115 38843998 Pvu5g0389 5 3644024 3646915 ECH
Pvu7g2654 7 49596988 49600731 Pvu5g0389 5 3644024 3646915 ECH
Pvu7g0065 7 460658 465371 Pvu5g0389 5 3644024 3646915 ECH
Pvu5g0389 5 3644024 3646915 Pvu5g0389 5 3644024 3646915 ECH