Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2114 ATGCCTTCTTTCACTCTCTCTTCTTCTTCTTCACCAGCCCTCTCATGTCCCCGGGCAAGCAAACACTTCAAATTGTTCAATGATGTGCCTTCTGTTCGAATGAATTCTAAATTTCCCTCGAGCGATCATGCTTTTAGTAGAATTAAAGCTACGTTGATTTCTGGAGGAGGGGACCTACTTTCCTATCCAAATAGCAATGGCATTATGATAGGTAAAAATCTGGTTGGAGATGAATCTGTACGGATCGATGTACAATCTAATGGAACACCAGCTGTAGACACGGGGATAACAAGCAATGTTTTCTCTGTTGATGGTGATGAATTTGATCTGGACAGCCCAACAGCAGGCTTTGCTTCCATCCCTGAGGCCATTGAAGACATTCGCCAGGGAAAGATGGTAGTGGTCGTGGACGACGAAGATCGAGAAAATGAAGGAGATTTGATAATGGCAGCACAGTTGGCAACACCCGAGGCAATGGCTTTTATTGTAAAGCATGGAACTGGGATAGTTTGTGTAAGCATGAAAGAGGAAGATTTGGATAGATTGGAACTTCCTTTGATGGTAAACAGTAAGGATAATGAGGAGAAGCTTTGTACGGCATTCACTGTGACAGTGGATGCTAAACATGATACCACCACTGGTGTGTCAGCTCATGATAGGGCAACAACAGTCAAAGCCCTTGCATCTAGAGATTCTACTCCAGGTGATTTCAACCGCCCAGGCCATATTTTCCCACTAAAATACAGGGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCTATACTATCTGGCATGGATCCAGTGGCAGTTTTGTGTGAAATTGTAGATGACGATGGTTCCATGGCTAGACTTCCAAAACTTCGCCAGTTTGCAGAGCGTGAAAACTTGAAAATTATATCTATTGCTGACTTAATAAGATATAGAAGAAAAAGAGATAAGTTGGTGGAACGCGCTTCTGCTGCACGGATACCTACAATGTGGGGACCATTCACAGCTTACTGTTACAGGTCCCTTTTAGACGGAATTGAGCATATTGCAATGGTTAAGGGCGACATTGGAGATGGACAAGATGTGCTTGTGAGGGTACACTCTGAGTGTCTAACGGGAGACATATTTGGATCTGCCAGATGTGACTGCGGAAATCAGCTTGCACTCTCAATGCAACAGATTGAGGCTGCTGGTAGGGGTGTGCTGGTATATCTCCGAGGACACGAAGGAAGGGGCATTGGATTGGGCCACAAGCTTCGTGCATATAACCTTCAGGATGATGGACGTGATACAGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCCAGGGAATACGGCATTGGCGCTCAGATGTTAAGGGACTTGGGTGTTAGATCTATGAAGCTGATGACCAACAATCCAGCAAAATATGTTGGGCTCAAAGGTTATGGTTTGACAGTTTCGGGTAGGATCCCAATATTAACACTCATTACTTCAGAGAACAAGAGATATCTAGAGACCAAACGTGTGAAAATGGGTCACATATATGAAATGGAAATTAATGGTAATGGCAGCAAGGTTGATGATGATTCTAGTACTGTTACTGGCTTATAG 1608 0.4403 MPSFTLSSSSSPALSCPRASKHFKLFNDVPSVRMNSKFPSSDHAFSRIKATLISGGGDLLSYPNSNGIMIGKNLVGDESVRIDVQSNGTPAVDTGITSNVFSVDGDEFDLDSPTAGFASIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLDRLELPLMVNSKDNEEKLCTAFTVTVDAKHDTTTGVSAHDRATTVKALASRDSTPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAILSGMDPVAVLCEIVDDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVERASAARIPTMWGPFTAYCYRSLLDGIEHIAMVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALSMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRSMKLMTNNPAKYVGLKGYGLTVSGRIPILTLITSENKRYLETKRVKMGHIYEMEINGNGSKVDDDSSTVTGL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2114 535 PANTHER 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE 29 527 - -
Pvu6g2114 535 TIGRFAM ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 118 315 IPR000422 GO:0008686|GO:0009231
Pvu6g2114 535 Gene3D DHBP synthase 108 321 - -
Pvu6g2114 535 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 115 319 IPR000422 GO:0008686|GO:0009231
Pvu6g2114 535 TIGRFAM ribA: GTP cyclohydrolase II 324 513 IPR000926 GO:0003935|GO:0009231
Pvu6g2114 535 SUPERFAMILY YrdC/RibB 116 318 IPR017945 -
Pvu6g2114 535 CDD GTP_cyclohydro2 321 513 IPR000926 GO:0003935|GO:0009231
Pvu6g2114 535 Gene3D GTP cyclohydrolase II 322 493 IPR036144 -
Pvu6g2114 535 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 116 512 IPR016299 GO:0009231
Pvu6g2114 535 PANTHER GTP CYCLOHYDROLASE II-RELATED 29 527 - -
Pvu6g2114 535 SUPERFAMILY RibA-like 320 491 IPR036144 -
Pvu6g2114 535 Hamap GTP cyclohydrolase-2 [ribA]. 320 516 IPR000926 GO:0003935|GO:0009231
Pvu6g2114 535 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 122 314 IPR000422 GO:0008686|GO:0009231
Pvu6g2114 535 Pfam GTP cyclohydrolase II 326 490 IPR032677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2114 Pvu-Chr6 30745772 30751118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2114 K14652 - gmx:100801046 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2169 2 37162284 37166832 Pvu6g2114 6 30745772 30751118 PCT