Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2169 ATGGCCTCTTCTATCAGTCTCTCCACTCCTTTCTACCGCCCTAGTGTATGCAAACAATTGAAATTGTTCACTGGGTTGCACAAGTTCTCACTCAGTGGACATGGGTCGGATTTGGCCTTTGTCCAACTCAACTCCAGTGCTACTTTTAGAATTAAAGCTACATTGACCTCTGGACGAGGAGTCTTGGGATCTTATCCAAACAGTAATGGTGTCGGAGCTGAGGGGCAACGTGATGTCGCGGCATTTGGAACTCCGGGAATAGACACAGCAGTGCCAGCAGGCAGTGGTTTTTCTGATGATGATGACGAGTATGACTTCGATAGTCCAACAGAAGGTTTTGCGTCCGTACCGGAGGCCATTGAAGACATTAGGAACGGAAAGATGGTAGTGGTTGTAGATGACGAGGATAGGGAAAATGAAGGAGACCTGATAATGGCTGCGGAGTTGGCTACACCTGAGGCCATGGCTTTTATTGTGAAGCATGGAACTGGGATAGTGTGTATAAGCATGAAGGAGGAAGATTTGGAGAGATTGGACCTTCCTTTGATGGTAAACAGTCAGTATAATGACGAGAAACTTCGCACAGCGTTCACTGTAACAGTGGATGCTAAACACGGTACTACCACAGGGGTGTCAGCTCGTGATAGGGCTACAACAGTCCTTGCCCTTGCATCCAAAGATTCAAAACCAAGTGATTTCAACCGTCCGGGCCATATTTTCCCACTAAAATACAGGGAGGGTGGTGTGCTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCCATACTTGCTGGTCTGAATCCTGCAGCAGTTCTGTGTGAGATTGTGGATGATGATGGTTCAATGGCTAGATTACCTAAGCTTCGACAGTTTGCAGAGCGTGAAAATTTAAAAATTGTTTCTATTGCTGACTTAATAAGATATAGAAGGAAGAGAGATAAACTAGTAGAGCCTGCTGGTTCTGCAGTAATACCAACAACGTGGGGGCCATTTACAGCTAACTGCTATAGATCACTTTTAGATGGCATTGAGCATATTACAATGGTTAAGGGTGACATTAGTGATGGACATGATGTACTTGTGAGGGTACACTCAGAGTGTCTCACAGGAGACATATTTGGATCTGCCAGATGTGACTGTGGAAATCAGCTTTCTATTGCAATGCAACAGATTGAGACTGCTGGTAGAGGTGTATTGGTCTATCTTCGTGGACATGAAGGAAGGGGCATTGGGTTGGGCCACAAACTTCGTGCCTATAACCTACAGGATGATGGACGGGACACTGTAGAGGCTAATGAAGAGTTGGGATTGCCTGTTGACTCAAGGGAGTATGGAATTGGTGCACAGATTTTGAGGGACTTGGGTGTTCGTTCTATGAAGCTAATGACAAACAATCCAGCAAAATACGTGGGGCTCAAAGGTTATGGTTTGACAATTTCCGGTAGGATACCATTGTTATCACTTGTCACAAAAGAGAACAAGAGATACTTAGAGACCAAACGTGTGAAAATGGGTCACGTATATGGCTTGCCAGAGAGTGGCAATGGTAAAGCCGGCAGTGGTGATGATTCTAATGCTGCTCCTGGCTTATAG 1599 0.4534 MASSISLSTPFYRPSVCKQLKLFTGLHKFSLSGHGSDLAFVQLNSSATFRIKATLTSGRGVLGSYPNSNGVGAEGQRDVAAFGTPGIDTAVPAGSGFSDDDDEYDFDSPTEGFASVPEAIEDIRNGKMVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIVCISMKEEDLERLDLPLMVNSQYNDEKLRTAFTVTVDAKHGTTTGVSARDRATTVLALASKDSKPSDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAILAGLNPAAVLCEIVDDDGSMARLPKLRQFAERENLKIVSIADLIRYRRKRDKLVEPAGSAVIPTTWGPFTANCYRSLLDGIEHITMVKGDISDGHDVLVRVHSECLTGDIFGSARCDCGNQLSIAMQQIETAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLLSLVTKENKRYLETKRVKMGHVYGLPESGNGKAGSGDDSNAAPGL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2169 532 CDD GTP_cyclohydro2 317 508 IPR000926 GO:0003935|GO:0009231
Pvu2g2169 532 SUPERFAMILY YrdC/RibB 112 314 IPR017945 -
Pvu2g2169 532 TIGRFAM ribA: GTP cyclohydrolase II 323 509 IPR000926 GO:0003935|GO:0009231
Pvu2g2169 532 PANTHER GTP CYCLOHYDROLASE II-RELATED 4 532 - -
Pvu2g2169 532 PANTHER 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE 4 532 - -
Pvu2g2169 532 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 118 310 IPR000422 GO:0008686|GO:0009231
Pvu2g2169 532 Hamap GTP cyclohydrolase-2 [ribA]. 316 512 IPR000926 GO:0003935|GO:0009231
Pvu2g2169 532 MobiDBLite consensus disorder prediction 510 532 - -
Pvu2g2169 532 Pfam GTP cyclohydrolase II 323 486 IPR032677 -
Pvu2g2169 532 Gene3D DHBP synthase 104 317 - -
Pvu2g2169 532 TIGRFAM ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 114 311 IPR000422 GO:0008686|GO:0009231
Pvu2g2169 532 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 111 315 IPR000422 GO:0008686|GO:0009231
Pvu2g2169 532 Gene3D GTP cyclohydrolase II 318 488 IPR036144 -
Pvu2g2169 532 SUPERFAMILY RibA-like 316 487 IPR036144 -
Pvu2g2169 532 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 112 508 IPR016299 GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2169 Pvu-Chr2 37162284 37166832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2169 K14652 - gmx:100791378 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2169 2 37162284 37166832 Pvu2g2169 2 37162284 37166832 ECH
Pvu2g2169 2 37162284 37166832 Pvu6g2114 6 30745772 30751118 PCT