Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2049 ATGGCGGTGGAATACAAGTGCTGTGAAACTCAGTTTTTCATACGGTTACTGATAATTGTGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTTGCCAAGTCTGGCACCCCTCAGGATCGCAAACATGCCGCAAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGCAACGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATAGTCTAGTTGTTGCATGGGGTGCTGTCCTGATTTCAGTAACATTAATTCTCCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGATTAGCGATTGGTGCAACAGTGGCTCCATTTGTCCGTGTCCTTGTATGGATATGTTTTCCTGTTGCCTATCCAATTAGCAAGTTGTTGGACTATTTGCTTGGGCATCGACATGAAGCACTTTTCCGTAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGAAATGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACAACAATCATTGCTGGAGCACTTGAACTCTCTGAGAAGACAGCCAGTGATGCCATGACTCCCATAAGAGAAATATTTTCTGTTGATATTAATTCAAAGCTTGATAGGGAATTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTCTACTACGAGGAGACTGCAAACATTATTGGACTTATCTTGGTCAAGAATTTACTGAGAATTGACCCAGAAGAAGGGTTATCGGTGAAAAGTGTGACAATAAGGAGAATCCCAAGGGTTCCAGAAACGATGCCACTGTATGATATTTTGAACGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTATCAGACACACTGACAAGACAGGTCAACACTCGTCCAACAATCATGCCAATGTGAGAGATGTGAAGGTAGACATTGATGGGGAGAAGACCCCCCAAGAGAATAATAATATGTTGAAAAGCAAGAGATCACTCCAAAAGTGGAAGAGCTTTCCAAACTCAAATAATTCCAACAGGGGTGGCTCCAGGAGCAGAAAATGGTCAAAAAATATGTACTCAGATATTTTGGAAATAGATGGAAATACACTTCCAACGCTGCCAGAAAAAGAAGAAGCTGTTGGAATTATTACCATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACCGATCATCAATTTGAAGATTCATGA 1278 0.4186 MAVEYKCCETQFFIRLLIIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPIREIFSVDINSKLDRELMNLILEKGHSRVPVYYEETANIIGLILVKNLLRIDPEEGLSVKSVTIRRIPRVPETMPLYDILNEFQKGHSHMAVVIRHTDKTGQHSSNNHANVRDVKVDIDGEKTPQENNNMLKSKRSLQKWKSFPNSNNSNRGGSRSRKWSKNMYSDILEIDGNTLPTLPEKEEAVGIITMEDVIEELLQEEIFDETDHQFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2049 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Pvu6g2049 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Pvu6g2049 425 Gene3D - 379 417 IPR046342 -
Pvu6g2049 425 MobiDBLite consensus disorder prediction 335 370 - -
Pvu6g2049 425 Pfam CBS domain 215 263 IPR000644 -
Pvu6g2049 425 Gene3D - 189 324 IPR046342 -
Pvu6g2049 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Pvu6g2049 425 MobiDBLite consensus disorder prediction 332 370 - -
Pvu6g2049 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Pvu6g2049 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Pvu6g2049 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Pvu6g2049 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2049 Pvu-Chr6 30311179 30314938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2049 K16302 - gmx:100795897 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2049 6 30311179 30314938 Pvu6g2049 6 30311179 30314938 ECH
Pvu2g2234 2 37976948 37982698 Pvu6g2049 6 30311179 30314938 PCT