Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2234 ATGGCGGTGGAGTACGCATGCTGCACGTCGGAGTTCTTCGTTCACATACTCGTGATCGTTCTGCTGGTTCTGTTCGCGGGCCTCATGTCGGGCCTCACTTTGGGCCTCATGTCCCTCAGCCTTGTTGATCTCGAGGTCCTCGCTAAGTCTGGTACTCCTCAAGATCGCAGTCACGCTGCGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTTTGTACACTGCTAATTTGCAATGCTGCAGCCATGGAGACACTTCCTATTTTTCTCGACGGTCTTGTTACTGCGTGGGGTGCTATCCTTATTTCGGTGACATTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGGGTGCTTGTATGTGTGTGCTTTCCGGTTGCCTTTCCAATTAGTAAGTTGTTGGACTTTTTGCTAGGCCATCGACATGAGGCCTTATTCCGTAGAGCTGAGTTGAAGACACTTGTAAATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACTATCATTGCTGGGGCACTTGAACTCAGCGAGAAGACAGCCAGTGATGCTATGACTCCTATAGCTGATACATTTGCTGTTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTTCTATGAGCAGTCTACAAACATTATAGGACTTATACTGGTGAAGAATTTATTGACTGTTCATCCAGAAGATGATGCATCCGTGAAGAGTGTAACTATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTAAATGAATTCCAGAAGGGCCATAGCCACATGGCAGTTGTTGTGAGACGGTGTGACAAGATGGAGGAACAATCTTCCCAAAATAATGCAGACGACTCGGTGAGAGATGTGAAGGTGGATATCGATGATGAAAAGCCTCCCAAGGAGAAAATTTTGAAACCCAAGTTGCCACTCCATAAGTGGAAAAGCTTCCCAAATACAAACATGTCAAATAGGGCTGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGAAGTCCCCTTCCTAAGCTCCCCGAAGAAGAAGAAGCTGTCGGAATTATTACAATGGAAGATGTTATTGAAGAACTTCTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCGTGA 1278 0.4413 MAVEYACCTSEFFVHILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRSHAAKILPVVKNQHLLLCTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCVCFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPIADTFAVDINSKLDRELMNEILEKGHSRVPVFYEQSTNIIGLILVKNLLTVHPEDDASVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKMEEQSSQNNADDSVRDVKVDIDDEKPPKEKILKPKLPLHKWKSFPNTNMSNRAGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2234 425 Gene3D - 379 417 IPR046342 -
Pvu2g2234 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Pvu2g2234 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Pvu2g2234 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Pvu2g2234 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Pvu2g2234 425 Gene3D - 191 325 IPR046342 -
Pvu2g2234 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Pvu2g2234 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Pvu2g2234 425 ProSiteProfiles CBS domain profile. 210 270 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2234 Pvu-Chr2 37976948 37982698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2234 K16302 - gmx:100801937 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2234 2 37976948 37982698 Pvu2g2234 2 37976948 37982698 ECH
Pvu2g2234 2 37976948 37982698 Pvu6g2049 6 30311179 30314938 PCT