Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2046 ATGGGGTTGTGCATTAAGGTTTGGATTTGTGTAGTGAGTGTGTTGGGGTTGGCGATTGTGGGTGATGTTGCGAAGGCTGAAGATTCAGTAACATACTATCTGTATGGACACAACGATGCACGATCAGAGGTTGGTGTGGAAAACATAGTTTGGAATAACACAGTTGCTGCTTTTGCACAGGACTATGCTAATCAGCGTACAGATTGCCAACTGATCCATTCGGGTGGTGGCGGCATGTACGGGGAGAATATTGCAATGAGCACCGGCGAGATGAGCGGCGCAGAGGCAGTGAAAATGTGGGTGGATGAGAAACAATACTATGACTACGATTCCAACTCTTGTGCTGCCGGCCAACAGTGCGGACACTACACTCAGGTTGTTTGGAGAAAATCGGTGCAACTTGGGTGTGCCAAAGTAAGATGCAACAATGGAGGCACCTTCATCACCTGCAACTATTCTCCCCCTGGCAACTTTCTTGGCGAAAGACCCTACTAA 495 0.4828 MGLCIKVWICVVSVLGLAIVGDVAKAEDSVTYYLYGHNDARSEVGVENIVWNNTVAAFAQDYANQRTDCQLIHSGGGGMYGENIAMSTGEMSGAEAVKMWVDEKQYYDYDSNSCAAGQQCGHYTQVVWRKSVQLGCAKVRCNNGGTFITCNYSPPGNFLGERPY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2046 164 SUPERFAMILY PR-1-like 28 164 IPR035940 -
Pvu6g2046 164 Pfam Cysteine-rich secretory protein family 35 152 IPR014044 -
Pvu6g2046 164 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 164 IPR001283 -
Pvu6g2046 164 Gene3D CAP 30 164 IPR035940 -
Pvu6g2046 164 CDD CAP_PR-1 33 164 - -
Pvu6g2046 164 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
Pvu6g2046 164 PRINTS Allergen V5/Tpx-1 family signature 49 67 IPR001283 -
Pvu6g2046 164 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Pvu6g2046 164 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Pvu6g2046 164 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Pvu6g2046 164 PRINTS Venom allergen 5 signature 49 67 IPR002413 -
Pvu6g2046 164 PRINTS Venom allergen 5 signature 94 109 IPR002413 -
Pvu6g2046 164 PRINTS Venom allergen 5 signature 119 138 IPR002413 -
Pvu6g2046 164 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 164 - -
Pvu6g2046 164 ProSitePatterns CRISP family signature 1. 121 131 IPR018244 GO:0005576
Pvu6g2046 164 SMART SCP_3 28 160 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2046 Pvu-Chr6 30285266 30285760 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2046 K13449 - gmx:100805116 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2046 6 30285266 30285760 Pvu6g2046 6 30285266 30285760 ECH
Pvu2g2238 2 38037149 38037811 Pvu6g2046 6 30285266 30285760 PCT