Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2238 ATGAAGACCTCAAATCTTGTGTTCATCTTGAGCATTATCTCATTGTGCAGCATTTGCTTCGCACAAAACTCCCCGAAAGATTACCTTGACGGGCATAACGAAGCTCGTAAAGAGGTTGGTGTTAAACCACTGACATGGAATGAAACCCTTGTAGAATATGCTCAGAAATATGTGGACTCCAAGAAGAAAACCTGTGAATTTGAGCATTCTATGGGGCCTTATGGGGAGAACTTGGGGCAGGGTGAGGGATTGACTGGCGTGGACTCGGTGAAAATGTGGTTGGGAGAGAAGGAGTTCTATGATCACAAGAGCAACAAGTGTGTTAAGGATGAGTGCTTGCATTATACTCAGTGTGTTTGGAACAGCACAGAAAGTGTTGGGTGTGCCAGAAGCAAATGTGACAATAACGTGATGTTCGTCATTTGCAGCTATTATCCTCCAGGCAATATCGAAGGGTTACCAGCTTTCTAA 471 0.4416 MKTSNLVFILSIISLCSICFAQNSPKDYLDGHNEARKEVGVKPLTWNETLVEYAQKYVDSKKKTCEFEHSMGPYGENLGQGEGLTGVDSVKMWLGEKEFYDHKSNKCVKDECLHYTQCVWNSTESVGCARSKCDNNVMFVICSYYPPGNIEGLPAF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2238 156 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Pvu2g2238 156 PRINTS Allergen V5/Tpx-1 family signature 89 102 IPR001283 -
Pvu2g2238 156 PRINTS Allergen V5/Tpx-1 family signature 112 128 IPR001283 -
Pvu2g2238 156 PRINTS Allergen V5/Tpx-1 family signature 139 152 IPR001283 -
Pvu2g2238 156 Pfam Cysteine-rich secretory protein family 29 144 IPR014044 -
Pvu2g2238 156 PANTHER - 7 152 - -
Pvu2g2238 156 Gene3D CAP 19 156 IPR035940 -
Pvu2g2238 156 CDD CAP_PR-1 25 152 - -
Pvu2g2238 156 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 7 152 IPR001283 -
Pvu2g2238 156 SUPERFAMILY PR-1-like 22 156 IPR035940 -
Pvu2g2238 156 ProSitePatterns CRISP family signature 2. 139 150 IPR018244 GO:0005576
Pvu2g2238 156 SMART SCP_3 23 152 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2238 Pvu-Chr2 38037149 38037811 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2238 K13449 - gmx:100802988 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2238 2 38037149 38037811 Pvu2g2238 2 38037149 38037811 ECH
Pvu2g2238 2 38037149 38037811 Pvu6g2046 6 30285266 30285760 PCT