Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2044 ATGGGGTTGTTCAAGATTTCATTTTGTACACTGTTTGTGTTAGGATTGGTGAGTGTTCACGCTCAAGACTCACCAGATGACTACGTGAACGAACATAACGCTGCAAGGTCAGAGGTTGGTGTTCCAAACATTGTTTGGGATAATACAGTTGCTGCTTTCGCACAAGACTACGCAAATCAACGCCAAGGTGACTGCAATCTGATCCACTCTGGTGGTGGAGGAAAATATGGGGAGAATCTTGCAGGGAGCAGTGGTGACCTAAGTGGAGAAGATGCAGTGAAAATGTGGGTGGGTGAGAAATCAAACTATGACTACAATTCCAACTCTTGTGTTGGCGGGGAGTGTCTGCACTACACTCAGGTTGTTTGGAAGAACTCTGTACGCGTTGGATGTGCCAAAGTAAGATGCAACAATGGAGGCACTTTCATCGGTTGCAACTATGATCCCCCTGGCAACTATGTTGGTGAAAAACCCTACTAA 480 0.4583 MGLFKISFCTLFVLGLVSVHAQDSPDDYVNEHNAARSEVGVPNIVWDNTVAAFAQDYANQRQGDCNLIHSGGGGKYGENLAGSSGDLSGEDAVKMWVGEKSNYDYNSNSCVGGECLHYTQVVWKNSVRVGCAKVRCNNGGTFIGCNYDPPGNYVGEKPY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2044 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 159 IPR001283 -
Pvu6g2044 159 CDD CAP_PR-1 25 159 - -
Pvu6g2044 159 SUPERFAMILY PR-1-like 14 159 IPR035940 -
Pvu6g2044 159 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 159 - -
Pvu6g2044 159 Gene3D CAP 23 159 IPR035940 -
Pvu6g2044 159 PRINTS Venom allergen 5 signature 44 62 IPR002413 -
Pvu6g2044 159 PRINTS Venom allergen 5 signature 90 105 IPR002413 -
Pvu6g2044 159 PRINTS Venom allergen 5 signature 114 133 IPR002413 -
Pvu6g2044 159 ProSitePatterns CRISP family signature 2. 142 153 IPR018244 GO:0005576
Pvu6g2044 159 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Pvu6g2044 159 PRINTS Allergen V5/Tpx-1 family signature 92 105 IPR001283 -
Pvu6g2044 159 PRINTS Allergen V5/Tpx-1 family signature 115 131 IPR001283 -
Pvu6g2044 159 PRINTS Allergen V5/Tpx-1 family signature 142 155 IPR001283 -
Pvu6g2044 159 Pfam Cysteine-rich secretory protein family 30 147 IPR014044 -
Pvu6g2044 159 SMART SCP_3 23 155 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2044 Pvu-Chr6 30272550 30273214 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2044 K13449 - gmx:100806194 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2044 6 30272550 30273214 Pvu6g2044 6 30272550 30273214 ECH
Pvu2g2240 2 38049387 38050072 Pvu6g2044 6 30272550 30273214 PCT