Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2240 ATGAAGATCTCAAATCTCGTGTTCATCTTGAGCATTATCTCATTGTGCAGCATTTGCTTCGCACAGAACACCCCGAAAGATTACCTTGACGTGCACAACGAAGCTCGTAAAGAGGTTGGTGCTAAACCACTAACATGGAATGAAACCCTTGTAGAATATGCTCAGAACTATGTGGACTCCAAGAAAAAAAACTGCGAATTTGAGCATTCTATGGGGCCTTATGGGGAGAACTTGGCGCAGAGTTCTGGGGATTTGACTGGCGTGAACTCGGTGAAACTGTGGCTGGAAGAGAAGGAGTTCTATGATTACAAGAACAACAAGTGTGTTAAGGATGAGTGCATGCATTACGTTCAGTGTGTTTGGAACACCACAGAGAGTGTTGGGTGTGCTAGAACCAAGTGTGACAATAACTGGATGTACGTCATCTGCAGCTATTACCCTGCAGGCAATATCGTAGGGCTTCTACCTTACTAA 474 0.4451 MKISNLVFILSIISLCSICFAQNTPKDYLDVHNEARKEVGAKPLTWNETLVEYAQNYVDSKKKNCEFEHSMGPYGENLAQSSGDLTGVNSVKLWLEEKEFYDYKNNKCVKDECMHYVQCVWNTTESVGCARTKCDNNWMYVICSYYPAGNIVGLLPY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2240 157 SUPERFAMILY PR-1-like 21 157 IPR035940 -
Pvu2g2240 157 ProSitePatterns CRISP family signature 2. 140 151 IPR018244 GO:0005576
Pvu2g2240 157 CDD CAP_PR-1 25 157 - -
Pvu2g2240 157 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Pvu2g2240 157 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Pvu2g2240 157 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Pvu2g2240 157 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
Pvu2g2240 157 Pfam Cysteine-rich secretory protein family 29 145 IPR014044 -
Pvu2g2240 157 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 7 157 IPR001283 -
Pvu2g2240 157 PANTHER - 7 157 - -
Pvu2g2240 157 SMART SCP_3 23 153 IPR014044 -
Pvu2g2240 157 Gene3D CAP 23 157 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2240 Pvu-Chr2 38049387 38050072 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2240 K13449 - gmx:100802988 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2240 2 38049387 38050072 Pvu2g2240 2 38049387 38050072 ECH
Pvu2g2240 2 38049387 38050072 Pvu6g2044 6 30272550 30273214 PCT