Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1881 ATGCACCAAGCCATTCCCTACAGAACCTGCATCCCTGCTACCGGCGCACGTGACCACTCACACGCCGGAGGGATTGCGGAATCCAATGGCGCTGATCCGGCCACCGTGGCCACCGTGGTTTCGGAGAACGCCGTGGTGATCATTGGGAGACGGGGCTGCTGCATGTGCCACGTCGTCAAAAGGTTGTTACAAGGCCTCGGAGTTAACCCTCCCGTTTACGAGGTCCACGAGGACCACGAAGCCACCGTCGCTCGCTACCTCTTCCCCCACGCCGCCGAAGAGCTCCAGTTTCCGGCGGTGTTCCTCGCCGGCAAGCTGTTCGGCGGGTTGGAACGAGTCATGGCCACTCATATTTCAGGTGAATTGGTTCCCATATTAAAGGACGCTGGTGCCTTGTGGCTCTGA 405 0.5975 MHQAIPYRTCIPATGARDHSHAGGIAESNGADPATVATVVSENAVVIIGRRGCCMCHVVKRLLQGLGVNPPVYEVHEDHEATVARYLFPHAAEELQFPAVFLAGKLFGGLERVMATHISGELVPILKDAGALWL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1881 134 TIGRFAM GlrX-like_plant: glutaredoxin-like family 36 134 IPR011905 -
Pvu6g1881 134 Pfam Glutaredoxin 45 106 IPR002109 -
Pvu6g1881 134 ProSiteProfiles Glutaredoxin domain profile. 33 133 - -
Pvu6g1881 134 SUPERFAMILY Thioredoxin-like 36 133 IPR036249 -
Pvu6g1881 134 PANTHER GLUTAREDOXIN 30 134 IPR011905 -
Pvu6g1881 134 PANTHER MONOTHIOL GLUTAREDOXIN-S9 30 134 - -
Pvu6g1881 134 Gene3D Glutaredoxin 29 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1881 Pvu-Chr6 29072453 29073361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1881 23 134 Miscellaneous Gene Families AT3G02000 41.525 1.06e-24 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1881 - K03676 gmx:100809924 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1881 6 29072453 29073361 Pvu6g1881 6 29072453 29073361 ECH
Pvu6g1881 6 29072453 29073361 Pvu11g1268 11 23555784 23556519 ECH