Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1268 ATGCAACAAGCAATTCCTTATAGGTCATGGCAACCTCTCATCTCATCTTCCCCCACCACTCACTTCACTACTATCAACAACACCACTAACATTACTCCCTCCTTTGTTTCCACCAAAATGGTGCCAAACATGGTCTTAGAGAACGCGGTTATAGTCTTCGCTAGGCGTGGTTGTTGCATGAGCCACGTGGTGAACCGATTGCTTTTGGGTCTTGGGGTGAACCCTGCCATGCACGAGGTGGAGGAGCATGACGAAGTGGGTGTGGTTAGAGAATTGGAAGCAATTGTGGGTGGCAACGAAAACAAGATGCAGTTTCCTGCGGTTTTTATTGGTGGGAAATTGTTTGGGGGATTGGATCGAGTTATGGCCACTCATATTTCTGGGGAATTGGTTCCAATACTCAAAGAAGCACGAGCTCTATGGCTCTAG 429 0.4755 MQQAIPYRSWQPLISSSPTTHFTTINNTTNITPSFVSTKMVPNMVLENAVIVFARRGCCMSHVVNRLLLGLGVNPAMHEVEEHDEVGVVRELEAIVGGNENKMQFPAVFIGGKLFGGLDRVMATHISGELVPILKEARALWL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1268 142 PANTHER GLUTAREDOXIN-C9 23 142 - -
Pvu11g1268 142 Gene3D Glutaredoxin 36 141 - -
Pvu11g1268 142 SUPERFAMILY Thioredoxin-like 40 141 IPR036249 -
Pvu11g1268 142 TIGRFAM GlrX-like_plant: glutaredoxin-like family 43 142 IPR011905 -
Pvu11g1268 142 ProSiteProfiles Glutaredoxin domain profile. 38 141 - -
Pvu11g1268 142 PANTHER GLUTAREDOXIN 23 142 IPR011905 -
Pvu11g1268 142 Pfam Glutaredoxin 50 114 IPR002109 -
Pvu11g1268 142 CDD GRX_GRXh_1_2_like 49 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1268 Pvu-Chr11 23555784 23556519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1268 43 142 Miscellaneous Gene Families AT4G15690 43.000 1.26e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1268 - - gmx:100527118 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1268 11 23555784 23556519 Pvu11g1268 11 23555784 23556519 ECH
Pvu6g1881 6 29072453 29073361 Pvu11g1268 11 23555784 23556519 ECH
Pvu5g1036 5 30003553 30004405 Pvu11g1268 11 23555784 23556519 PCT