Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1819 ATGGCGGAAAGGAAATTGAATATTAATGCCCCTCTCATGTCTGTGAGACGTGGTTCTGCCACATCACCGTCCTTGACTGAAGCAAGGAAGAAGATTCTAGAGAAACGCCACAGTCTTCCATACCACAAATCAGACGCGACCTTGGATCAGGTAACAAAACCAGTTGCAGTTCCTTTCAATTGGGAGCATATCCCTGGAAGACGCAAGGGCAATGGTGGATCTGAGCCTCATCCTCCCAAGGCCACTTCAATCACTCCAAGCCCAAGGCTTCCTCCAGGAAATTCAACCAATGCTACCAAACAACCATTGGAAAGGGAAAATAAAGCTGCAAACAAATTCAAGTCCTCAAATAAATCCAAGTCTTTCAGCGTCAGTGTGGCTAAAGTAGACACTGTGAAAGAGAGAAAAACAGAGAAGATAGAGAAAATAGTTGAGAGCAGAAGGTCCAATGTGAAGTATGATGATGATGATGATGATGCTTTTTCTGACGCCCTTGAAACACTGTCACACACAGAATCATTCTCCATGAACTGTAGTGTGAGTGGTGTAAGCGGGTTAGAAAATATGAGCGCAAACAAGTCTGGAACCTTTTCCACTGATCAACAAACTAGAGACTTCATGATGAACCGATTCTTGCCTGCTGCAAAGGCCATGACTTTACAGCCTTCTCAATATTCTTCAAAAAAGCAATCTGTACTAGTAGAACAACAACCTAGAGATGTTAGCAAATTGATTCGCGAGGAAAAGAAGCCATTGTCTAATAGGCATAACACTGCTATTATACCATACCATGGCCACGGTCAAGAGGAAGAAAGTGAAGACGAAGGTGATGGTAACGAATGCGACAACTCTTCTGATATTGCAGCTAAAGGCTGCGGGTTGTTACCTCAATTACATATTAGGAATTCACTGTGCTTATTGAATCCTGTGGCTGCGATCAAAATGAAAAACCAGGTTTCCTTGCCTTCAGCCAGTGAGGTTGTGAAACCTAACAAAACTTCTCATATTAGATCTTTTAGCCCAGTTCCAGCTGTAAAGAAGGCTTGGGACGCAATTCACAAGAACAAATCAAGCTCTAGGGCAGCATCACCTGACAAGCAAGAGGGTAAAAAGAAATTGACTAGTGAATCAAACAGATTTACCTATTCTGGTGAGTTGCTTCCAGGTAGACTCTCTCCCTTCCGTCGCTCAAGAGCAGCTGCTACTGGTATATCTCCCTCTCGAAGACCTCAATCTCCCTTTCGTGGCGCCAAGTTGCTTGGTGATTCTAAAGAGGCTGAAAATTATAAGTTTAGCAAGGTGAAATTTCACAGCGGTGTGCTTGGAACTGTTCAAGATGTGCTGTCCCAAGGAAACAAAAGAACTTCATATTCAGGAAGTCTCACACTCGAAAAGACATTGTACATAGATACAGTCAGCACAGCGAAATTACCATCTTCAAATGTAAGTTCTTTGGATAACACACGGAGGGTAGATACTATGATTGCAGACTTAGAGAGAAGAAGGGGGAAAGAAAGTTATTCCTCCATAGGATCTTCTCAAGATATGAAACAATTACGATGTGCTGTGGAAGAAAAGGCCACATTTGATACTGAAGTGTTAAATTCTTTGGATTCCATTCCACCCAGTTTGTTTAGAATTTTGAATCTCACAGCCAAAGAAGGAAAAACTGAAGGATTGACAACTGATCAAAATATTAGCCAAGAACCCGAGTCCTTGTCACTTGTGCAAGGGACATTTGTTGAAGATTCAAAGATCAATGCCCAGCAAATTGTGTTAGTTAACGATTCAGGAAAATATTGTGCTGACTCTGTCGTGTCTCCTCTTCCTCCACCATTACCAAAATCACCTTCCGAGTCCTGGCTTTGGCGTGCCCTGCCTTTAGTGTCTGTGAAGAATTCTTTCCTGCACTCAAGTCAAGGTACTCAAACCCAAGCTAAAAGGCATGATTGTAATGCAACATCTGGTAATCTCAAGTGGGAAACAATAGTGAAAACTTCAAATTTGCATCATGATCATGTACGCTATTCTCAGGAACTTCCGACGCATAAATCTCAGCACTAA 2064 0.4225 MAERKLNINAPLMSVRRGSATSPSLTEARKKILEKRHSLPYHKSDATLDQVTKPVAVPFNWEHIPGRRKGNGGSEPHPPKATSITPSPRLPPGNSTNATKQPLERENKAANKFKSSNKSKSFSVSVAKVDTVKERKTEKIEKIVESRRSNVKYDDDDDDAFSDALETLSHTESFSMNCSVSGVSGLENMSANKSGTFSTDQQTRDFMMNRFLPAAKAMTLQPSQYSSKKQSVLVEQQPRDVSKLIREEKKPLSNRHNTAIIPYHGHGQEEESEDEGDGNECDNSSDIAAKGCGLLPQLHIRNSLCLLNPVAAIKMKNQVSLPSASEVVKPNKTSHIRSFSPVPAVKKAWDAIHKNKSSSRAASPDKQEGKKKLTSESNRFTYSGELLPGRLSPFRRSRAAATGISPSRRPQSPFRGAKLLGDSKEAENYKFSKVKFHSGVLGTVQDVLSQGNKRTSYSGSLTLEKTLYIDTVSTAKLPSSNVSSLDNTRRVDTMIADLERRRGKESYSSIGSSQDMKQLRCAVEEKATFDTEVLNSLDSIPPSLFRILNLTAKEGKTEGLTTDQNISQEPESLSLVQGTFVEDSKINAQQIVLVNDSGKYCADSVVSPLPPPLPKSPSESWLWRALPLVSVKNSFLHSSQGTQTQAKRHDCNATSGNLKWETIVKTSNLHHDHVRYSQELPTHKSQH* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1819 687 MobiDBLite consensus disorder prediction 59 104 - -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 258 282 - -
Pvu6g1819 687 Pfam Protein of unknown function (DUF688) 1 484 IPR007789 -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 353 375 - -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 397 416 - -
Pvu6g1819 687 PANTHER F28N24.8 PROTEIN 1 686 - -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 1 26 - -
Pvu6g1819 687 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 1 686 - -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 353 377 - -
Pvu6g1819 687 MobiDBLite consensus disorder prediction 87 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1819 Pvu-Chr6 28588611 28592484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1819 - - gmx:100782650 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1819 6 28588611 28592484 Pvu6g1819 6 28588611 28592484 ECH
Pvu6g1819 6 28588611 28592484 Pvu11g1339 11 28741103 28744877 ECH
Pvu2g2416 2 40076650 40078023 Pvu6g1819 6 28588611 28592484 PCT