Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2416 ATGGCCATTCCCTACCCCCATTTCATCGCCACCGAGAAGGCCGCCATGGACGCCGGTCTCCTCCTCCCTTCCTCCCCCTCCCTCATCCTCACCCAAGATGACCTCAAGAAGATCGCCGCCTACAAGGCCGTTGAGTATGTCGAATCCGGCATGGTCCTCGGCCTCGGCACTGGCTCCACCGCCAAGCACGCCGTGGACCGCATCGGCGAACTTCTCCGCCAGGGCAAACTCAAAGACATTGTCGGAATCCCCACCTCCAAGATAACCCACGAGCAGGCACTCTCCCTTGGCATCCCCCTGTCCGATCTTGAGTCCCACCCCGTCGTCGATCTGGCCATCGACGGTGCCGACGAGGTTGACCCTTTTCTCAACCTCGTCAAGGGTCGCGGAGGCTCCCTCCTTAGGGAGAAGATGGTGGAGAGCGCGTGCAAGAAGTTTATTGTTATTGTTGACGAGTCCAAGCTCGTGAAGTATTTAGGGGGAAGTGGATTGGCCATGCCCGTTGAGGTTATTCAGTTTTGTTGGAGGTTCACTGCTGAGAGGTTGCGCAGGCTGTTTGAGGAGGCTGGGTGTGTTGCCAAGCTTAGGACTTTTGGGGAGAAGGAGGAGCCCTTTGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCGAGAGGAGTATTGGGGATTTGAAGGCTGCCAGTGAAGCAATTCTGCAGCTTGCTGGGGTGGTGGAGCATGGCATGTTTCTGGATATGGCTACTACTGTTATTGTGGCAGGGGAACTTGGCTTGACGATGAAGAATAAGTAG 795 0.5547 MAIPYPHFIATEKAAMDAGLLLPSSPSLILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSKITHEQALSLGIPLSDLESHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVKYLGGSGLAMPVEVIQFCWRFTAERLRRLFEEAGCVAKLRTFGEKEEPFVTDNGNFIVDLYFERSIGDLKAASEAILQLAGVVEHGMFLDMATTVIVAGELGLTMKNK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2416 264 TIGRFAM rpiA: ribose 5-phosphate isomerase A 35 258 IPR004788 GO:0004751|GO:0009052
Pvu2g2416 264 Gene3D - 158 242 - -
Pvu2g2416 264 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 164 245 - -
Pvu2g2416 264 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 264 - -
Pvu2g2416 264 CDD RPI_A 35 255 IPR004788 GO:0004751|GO:0009052
Pvu2g2416 264 Hamap Ribose-5-phosphate isomerase A [rpiA]. 32 262 IPR020672 GO:0004751|GO:0009052
Pvu2g2416 264 Gene3D - 35 256 - -
Pvu2g2416 264 SUPERFAMILY NagB/RpiA/CoA transferase-like 31 215 IPR037171 -
Pvu2g2416 264 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 81 256 IPR004788 GO:0004751|GO:0009052
Pvu2g2416 264 PANTHER ISOMERASE, PUTATIVE-RELATED 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2416 Pvu-Chr2 40076650 40078023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2416 K01807 - gmx:100790894 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2416 2 40076650 40078023 Pvu2g2416 2 40076650 40078023 ECH
Pvu2g2416 2 40076650 40078023 Pvu6g1819 6 28588611 28592484 PCT