Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1582 ATGAATGCAGTAGCTATCTTGCTTTTTGATCAACCAAATATATATTCTTTTTCTCTTTTGGCTTTGCATTCATTCGCCATATTTCTGAAACGGACCTATCAAGCAAGTTTTAGAGAAGGGGCCAATGAACATTCTTTGCATGCCATCCTTCTGAGTTTACGAAGTTGTCATGTTTCTCTGTCTTTTCTCATCACTCTTCACAAGTTCAACCGTTATTACAGGAACACCAGCCATCCAAATTCTAGAATTTCGGAATTTGGATTTCCTCTGTCTATACTCAATTTGAGGTCTTCTAAGAGGACCCCACAGCAATACGTGGAAGCCATGCCGGTGTTGGAAACTTTAAGGAGGGTGAAACGTTTAAGGTTGTTTGAACCGTCGGTTAGCGTTGCTGGGTTTTCTCTAGTATCTGCCTTTGTTATATGCAGCTTCTTCTTCTTGGATTATAAGGAACTCGGTGGAAGGTTCGGGTTCTCGGGTCAATCTGAGAGGGTTACTTGGTCGCACCAGAAAAGAGGTTCAGTAGAGGAACGTGTGCATAGAGTTGAGTTTCTTGGAGAAAAGGGTGGTGGGTGTGATTTGTTTGAGGGTAAATGGGTTTGGGATGAAAGTTACCCTTTGTATGAGTCAAAAGATTGTAGCTTCGTTGATCCGGGATTTCGGTGTTCGGAGAACGGAAGACCTGATTTGTTTTACACAAAGTGGAGGTGGCAACCCAAAGCCTGCAACTTGCCCAGATTGAATGCAACAATGATGTTAGAAAAACTGCGAAACAAGCGCTTGGTGTTTGCTGGGGACTCAATTGGGAGAAACCAATGGGAATCACTATTATGCATGCTCTCTGCTGCAGTACCTAACAAGGATTCAATATATGAAGTGAATGGTAGCCCAATTACAAAGCACAAGGGGTTCTTGGCGTTCAGATTCAAGGATTATAACTGTACAGTGGAATACTACAGAACTCCATTTCTTGTACTGCAAAGCCGACCTCCTCCAAGAACTGCTGGAAAGATTAGGACAGTACTGAAGTTGGATCAGATGGATGGGTACTCTTTGAAATGGAGAGATGCAGATGTCTTGGTTCTTAACACAGGGCACTGGTGGAGTTATGAGAAAACCATAAAAGGGGGCTGTTATTTCCAAGAAGGTATGGAAGTGAAGTTGGAAATGAAGGTAGAAGAAGCATATAAGAGGTCCATTGAAACAGTATTGAACTGGATACAAAATTCTGTAAATGCTAGAAAGACTCAAATTTTCATTCGTACTTATGCCCCTGTGCATTTCAGAGGTGATTGGAGAAAAGGTGGAAGTTGTCATTTGGAAACACTGCCAGGGCTTGGGTCCTCATTGGTGCCTAATGATAACTGGTCACAATTCAAAATAGCCAATTCTGTGCTATTAGCACATACAAACACCAGTGAAGTTTTGAAGTTCAAGATATTGAATGTAACTCAGATGACAGCTCTGAGAAAAGATGGGCATTCATCCATATATTATCTGGGCCCTAATGCAGGCCCCACACCTCTCCATCGCCAAGATTGCAGCCACTGGTGTCTCCCTGGAGTACCAGATACTTGGAATGAGCTACTTTACGCATTGTTCCTTAAACATGAAACTTCTCATAGACAAAACTAG 1635 0.4226 MNAVAILLFDQPNIYSFSLLALHSFAIFLKRTYQASFREGANEHSLHAILLSLRSCHVSLSFLITLHKFNRYYRNTSHPNSRISEFGFPLSILNLRSSKRTPQQYVEAMPVLETLRRVKRLRLFEPSVSVAGFSLVSAFVICSFFFLDYKELGGRFGFSGQSERVTWSHQKRGSVEERVHRVEFLGEKGGGCDLFEGKWVWDESYPLYESKDCSFVDPGFRCSENGRPDLFYTKWRWQPKACNLPRLNATMMLEKLRNKRLVFAGDSIGRNQWESLLCMLSAAVPNKDSIYEVNGSPITKHKGFLAFRFKDYNCTVEYYRTPFLVLQSRPPPRTAGKIRTVLKLDQMDGYSLKWRDADVLVLNTGHWWSYEKTIKGGCYFQEGMEVKLEMKVEEAYKRSIETVLNWIQNSVNARKTQIFIRTYAPVHFRGDWRKGGSCHLETLPGLGSSLVPNDNWSQFKIANSVLLAHTNTSEVLKFKILNVTQMTALRKDGHSSIYYLGPNAGPTPLHRQDCSHWCLPGVPDTWNELLYALFLKHETSHRQN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1582 544 PANTHER - 124 538 - -
Pvu6g1582 544 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 124 538 IPR029962 GO:0016413
Pvu6g1582 544 Pfam PMR5 N terminal Domain 191 243 IPR025846 -
Pvu6g1582 544 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 244 532 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1582 Pvu-Chr6 26513566 26516595 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1582 - - pvu:PHAVU_006G152100g 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1582 6 26513566 26516595 Pvu6g1582 6 26513566 26516595 ECH
Pvu3g0954 3 18464450 18469094 Pvu6g1582 6 26513566 26516595 PCT