Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0954 ATGTCTTCTCCTAAGAACTCATCACAACATGAAGCTGAAGTCATGCCACTTTTTGAAGCTATCAGGAGGTCTAAGCGCTTAAGGTTGTTCGAGCCGTCTTTGGGTGTTCTTGGGTTTGTTGTTGTTACTGTCTTTGTGATTTGTTGCTTCTTCTATTCGGATAATAGATACCCTGCTTCAAGACTTGGATTCTTGGACCAACCACAGAGGTTTGCTTGGTTGCGGATAAACGGGTCTACTGGGCAACGCAGAGTTGAGTTTCTTGGAGGTAAGGGTGGTGGGTGTGATTTGTTTGACGGGGAATGGGTTTGGGATGAGAGCTACCCTTTGTATCAATCAAAAGATTGCAGTTTTCTGGACGAAGGTTTTCGATGTTCGGAGAATGGAAGACGTGATTTGTATTACACAAAGTGGAGGTGGCAGCCCAGAAGTTGCAACTTGCCAAGATTCAATGCAACATTGATGTTGGAGAAACTGCGAAACAAACGAATAGTGTTTGCGGGGGACTCAATTGGGAGGAACCAATGGGAATCACTCTTATGCTTGCTCTCAACTGGAGTTTCTAACAAGGAATCAATCTATGAAGTGAATGGCAGCCCAATTACAAAGCACAAGGGGTTCTTGGTGTACAAATTCAAGGATTTTAACTGTACAGTGGAATACTATAGAGCTCCATTTCTTGTATTGCAGAGCCGGCCTCCTAAAGGAGCTCCTCAAAATATTAGGACAACTCTCAAAGTGGATACAATGGATTGGAACTCTGAGAAGTGGAGAGATGCAGATATCCTGGTTCTTAACACAGGGCACTGGTGGAATTATGAGAAAACAATAAGAGGGGGTTGCTATTTTCAAGAAGGCGTGGATGTTAAGCTGGAAATGCAGGTAGAAGATGCATACAAACAGTCCATTCAGACAGTAATGAACTGGATACAAGATACAGTAAATCCTAGCAAGACCCAGATTTTCTTTCGTACTTTAGCCCCAGTGCACTTCAGAGGCGGGGATTGGAAAAACGGTGGAAACTGTCATTTGGAAACGCTTCCGGAGCTTGGCTCCTCACTGGTGCCTAATGACAACTGGTTACAATTCAAAATAGCCAATGCTGTTTTGTCTGCACACACAAATATCTCTGAAACTAAGAAGTTCATGGTGTTGAATGTAACTCAAATGACTGCTCGTAGAAAAGATGGGCATTCATCGGTCTATTATCTTGGTCGTAATGTCGGCCCCGTGATGCCTCATCGTCGCCAAGATTGCAGCCATTGGTGTCTGCCTGGTGTACCTGACACTTGGAATGAGATGCTCTATGCACTGGTGCTTAAACATGAAACTGCTCACAGAGGGAACCTGTGGCATTCATGA 1362 0.4413 MSSPKNSSQHEAEVMPLFEAIRRSKRLRLFEPSLGVLGFVVVTVFVICCFFYSDNRYPASRLGFLDQPQRFAWLRINGSTGQRRVEFLGGKGGGCDLFDGEWVWDESYPLYQSKDCSFLDEGFRCSENGRRDLYYTKWRWQPRSCNLPRFNATLMLEKLRNKRIVFAGDSIGRNQWESLLCLLSTGVSNKESIYEVNGSPITKHKGFLVYKFKDFNCTVEYYRAPFLVLQSRPPKGAPQNIRTTLKVDTMDWNSEKWRDADILVLNTGHWWNYEKTIRGGCYFQEGVDVKLEMQVEDAYKQSIQTVMNWIQDTVNPSKTQIFFRTLAPVHFRGGDWKNGGNCHLETLPELGSSLVPNDNWLQFKIANAVLSAHTNISETKKFMVLNVTQMTARRKDGHSSVYYLGRNVGPVMPHRRQDCSHWCLPGVPDTWNEMLYALVLKHETAHRGNLWHS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0954 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 33 444 IPR029962 GO:0016413
Pvu3g0954 453 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 147 437 IPR026057 GO:0016740
Pvu3g0954 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 11 33 444 - -
Pvu3g0954 453 Pfam PMR5 N terminal Domain 94 146 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0954 Pvu-Chr3 18464450 18469094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0954 - - gmx:100776300 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0954 3 18464450 18469094 Pvu6g1582 6 26513566 26516595 PCT