Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1263 ATGGTGGTTATAAGGAGTGAAAAGATTTTACCCATTCATCTTCCCGTTGTGGACTTATCCACAGAAAGATCAATGGTGAGAAAACTCATAGTGAAAGCTTGTGAGGAGTACGGTTTCTTCAACGTGATCAACCATGGAGTTCCCTGCGACACCATAGCCAAAATGGAAGAAGCAGCTTTTGATTTCTTTGCGAAGCCACTGGCCCAAAAGAAACAACTTCCCCTTTATGGCTGCAAGAACATAGGCTTCAATGGAGACATGGGAGAGATTGAGTACCTTCTCCTTAGTGCTACTCCTCCCTCCATGGCTCACTTCAACAACATCTCCAATGTGCCTTCAAACTTCAGCTGTAGTGTGAGTGCATACACAGAGGGAGTGAGGGAGCTGGCATGTGAGATTTTGGAGCTAATGGCAGAGGGTCTGGGGGTTCCGGATAGATGGTTTTTGAGCAGGTTGATCAGGGAGGTTGATAGTGACTCAGTCCTGAGGTTCAATCACTACCCACCGATACTTAACAAAGACTGCAAGGATAAGGACAAGTCTCCCTCCCACAACCACACCAAGGTTGGCTTTGGGGAGCATTCTGACCCTCAGATCCTTACCATCCTCAGATCCAATGACGTGTGTGGCCTCCAAATCTCTCTTCAAGATGGGGTGTGGAACCCAGTTGCTCCTGACCCCTCAGCTTTCTGTGTTAATGTGGGTGATCTCTTGCAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGACACAGGGCTGTGACAAACTCACACAAGTCTAGAATGTCGGTGGCGTATTTTGGGGGTCCACCACTTGATGCATGCATTGTTGCTCCCTCAGTTATGGTTACACCCCAGAGGCCCTCCCTCTTCAAACCCTTCACTTGGGCTGAATACAAGAAAGTCACCTACTCAATGAGGCTGGGAGAACGCCGCATTGACCTTTTCAGGAACTGCACTCAACTCGACTGA 972 0.4815 MVVIRSEKILPIHLPVVDLSTERSMVRKLIVKACEEYGFFNVINHGVPCDTIAKMEEAAFDFFAKPLAQKKQLPLYGCKNIGFNGDMGEIEYLLLSATPPSMAHFNNISNVPSNFSCSVSAYTEGVRELACEILELMAEGLGVPDRWFLSRLIREVDSDSVLRFNHYPPILNKDCKDKDKSPSHNHTKVGFGEHSDPQILTILRSNDVCGLQISLQDGVWNPVAPDPSAFCVNVGDLLQVMTNGRFVSVRHRAVTNSHKSRMSVAYFGGPPLDACIVAPSVMVTPQRPSLFKPFTWAEYKKVTYSMRLGERRIDLFRNCTQLD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1263 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 318 - -
Pvu6g1263 323 Gene3D - 3 307 IPR027443 -
Pvu6g1263 323 PRINTS Isopenicillin N synthase signature 30 47 - -
Pvu6g1263 323 PRINTS Isopenicillin N synthase signature 194 215 - -
Pvu6g1263 323 PRINTS Isopenicillin N synthase signature 230 256 - -
Pvu6g1263 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 14 73 IPR026992 -
Pvu6g1263 323 Pfam 2OG-Fe(II) oxygenase superfamily 159 268 IPR044861 -
Pvu6g1263 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 157 270 IPR005123 -
Pvu6g1263 323 SUPERFAMILY Clavaminate synthase-like 11 309 - -
Pvu6g1263 323 PANTHER PLANT GIBBERELLIN 2-OXIDASE 4 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1263 Pvu-Chr6 23583624 23589488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1263 12 317 Glycosyltransferase AT5G59530 27.795 8.28e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1263 K04125 - gmx:100811043 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1263 6 23583624 23589488 Pvu6g1263 6 23583624 23589488 ECH
Pvu3g1226 3 29480496 29484449 Pvu6g1263 6 23583624 23589488 PCT