Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1226 ATGGTGCTGGCTGCCCCAATCCCAATAAGGAGCGATGGGATTCTCCCCAGTGAGCTTCCCGTGGTGGACCTCTCAGGCGAGAGGGCGGAAGTGGCAAAAGTGATCGTGAAAGCGTGTGAAGAATACGGTTTCTTCAAAGTGATAAACCACGGTATCAGCAAGGAAGTTATAGCGAAAACTGAAGAAGCAGGGTTCGGTTTCTTTGGGAAAGCGATGGTGGAAAAGAAAGTGGCGGCACCTGCATATGGGTGCAAGAACATAGGTGTCAATGGAGACATGGGTGAGGTGGAGTACCTTCTCCTCAGTGCCACCACCGACTCCATTGCTCACATTTCCAAAACCATATCCACTGACCCATTAAATCTCAGCAATAGCTTGAGTGCATACACAGAAGCAGTGAAAGAGCTAGCATGTGAGATATTGGAGGTGATGGCAGAGGGGCTGGGGGTCCCGGACACTTGGGTTTTCAGCAGATTGATAAGGGATGGTGAAAGTGACTCAGTGCTGAGGCTCAATCACTACCCACCTATAATTAACAGAGAGTGGTGCATGGAGAAGGACAAAGATAAGGACAAGTCATCACAAATTAGCAAGGTTGGGTTTGGGGAGCATTCTGACCCTCAGATCCTCACCATTCTCAGATCCAACGACGTGGGAGGCCTACAAATTTCTCTTCCAGATGGGGTGTGGATCCCAGTCACCCCTGACCCCTCTGCATTCTATGTGAATGTGGGTGATGTACTACAGGTTATGACAAATGGAAGATTTGTGAGCGTGAGACACAGGGCAATGACGAACTCATACAAGTGTAGAATGTCAGTGGCATATTTTGGGGCTCCACCTCTGCATGCAACCATTGTTGCTCCCTCAGTTATGGTCACACCTCAGAGGCCCTCTCTCTTCAGACCCTTCACTTGGGCCGAATACAAGAAAGCCACATACTCTCTCAAGCTTGGAGACACACGCCTTCAGCTTTTCAGAAACTGCAAACGCTGA 996 0.493 MVLAAPIPIRSDGILPSELPVVDLSGERAEVAKVIVKACEEYGFFKVINHGISKEVIAKTEEAGFGFFGKAMVEKKVAAPAYGCKNIGVNGDMGEVEYLLLSATTDSIAHISKTISTDPLNLSNSLSAYTEAVKELACEILEVMAEGLGVPDTWVFSRLIRDGESDSVLRLNHYPPIINREWCMEKDKDKDKSSQISKVGFGEHSDPQILTILRSNDVGGLQISLPDGVWIPVTPDPSAFYVNVGDVLQVMTNGRFVSVRHRAMTNSYKCRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLKLGDTRLQLFRNCKR* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1226 331 Gene3D - 9 318 IPR027443 -
Pvu3g1226 331 PRINTS Isopenicillin N synthase signature 35 52 - -
Pvu3g1226 331 PRINTS Isopenicillin N synthase signature 204 225 - -
Pvu3g1226 331 PRINTS Isopenicillin N synthase signature 240 266 - -
Pvu3g1226 331 PANTHER PLANT GIBBERELLIN 2-OXIDASE 4 328 - -
Pvu3g1226 331 Pfam 2OG-Fe(II) oxygenase superfamily 166 278 IPR044861 -
Pvu3g1226 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 328 - -
Pvu3g1226 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 280 IPR005123 -
Pvu3g1226 331 SUPERFAMILY Clavaminate synthase-like 16 320 - -
Pvu3g1226 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 78 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1226 Pvu-Chr3 29480496 29484449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1226 7 327 Glycosyltransferase AT5G59530 28.070 3.67e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1226 K04125 - gmx:100816206 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1226 3 29480496 29484449 Pvu3g1226 3 29480496 29484449 ECH
Pvu3g1226 3 29480496 29484449 Pvu6g1263 6 23583624 23589488 PCT