Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1211 ATGAGCGTGGTTGCCATGGTTCTTCTCACTCCCATATTTCTGTTAACCCTCGCCGCCGCGCTTATAGCGGTGATTGGGGCGAAGGTGTTCCAGACGGGGTGCGTCAAGAGGGTATGGAGAAGAATGGAAGATTGGTTTCACGTGTATCAGTTCCTCACAGTACCTGAACTCAACCAAACCAAACACCAAAACCAGCTCTACACAAACCTCTCCCTATACTTACATTCACTACCTTCCATCCAAGACTCCCACTTCGCCAACCTCGTAACTGGGAAGAACCAAAACGACATCGTCCTCTGCCTCGCCCCCAACCAAATCATCCAGGACAATTTTCTCGGAGCCACAATCTACTGGTTCAACCAACCCACTCATACCAACCCAAAAGGAACCGGAACCTACGTTCTCAAGATCAGGAAGGTGGACAAGCGCCGAATCCTCCGTCCTTATCTTCAGCACATTCACGCCGTAGCCCACGAAATCGAGCAGCAAGGGAAGCGCGACTTGTGCCTCTTCACCAACAGCGCCGATGAGTTTGGTCACTGGAGATCCGTTCCGTTTACGCATCCTTCTACGTTCGACACCATCGCCATGGAACCGGATCTCAAAAACAAGGTCAAATCCGATCTTGAATCCTTCCTTAGAGCGAAACAGTACTACCACCGCAACGGCCGCGTCTGGAAACGGAGCTTCCTCCTCTACGGTCCATCCGGCACCGGAAAGTCGAGCTTCGTCGCCGCCATGGCCAATTTCCTCTCCTACGACGTGTTCGACATCGACCTGAATAAAATCCCTAGTGATTCGGAGCTGAAATTGCTCCTCCTGCATACGACGCCGAAATCGGTGGTGGTGATCGAGGACCTGGACCGGTTTGTGGCGGAGAAAACCGCGAGAATAAGCGTTTCGGGGATACTGAACTTCATGGACGGTCTTATAACCTCGTGTTGCGCGGAAGAGAGGGTGATGGTGTTCACGATGAACACGAAGGAGCATGTTGACCCGAACCTGCTTCGTCCGGGTCGGATCGATGTGCATATCCATTTTCCGTTGTGTGATTTTTCGGCGTTTAAGACGCTGGCGAATAGTTACCTTGGGGTGAAGGAGCATAAGCTGTTCCCTCAGGTGCAGGAGATTTTCCAAAACGGTGCGAGTTTGAGTCCCGCTGAAATCGGTGAGTTGATGATCGCGAACCGGAACTCGCCCAGTCGGGCCATTAGATCAGTCATCACCGCATTGCAAACGGACGGTGATGGCAGGGGGTGCGGCTTGATGGGAAAGCAGAAGGAGGAGGATGAAATGGATGAACCTGATGGGGTTGTCTGCGGTGAGGGTGTCAATACGGTTAAGGATTTGCGGAGACTGTACAGTTTTTTCAGATTCAGGGTTACAAGAAAATCTTCGTCCTCGAATTCTTCCTTGCCCGCTAGTCCATTGCGATAG 1437 0.5191 MSVVAMVLLTPIFLLTLAAALIAVIGAKVFQTGCVKRVWRRMEDWFHVYQFLTVPELNQTKHQNQLYTNLSLYLHSLPSIQDSHFANLVTGKNQNDIVLCLAPNQIIQDNFLGATIYWFNQPTHTNPKGTGTYVLKIRKVDKRRILRPYLQHIHAVAHEIEQQGKRDLCLFTNSADEFGHWRSVPFTHPSTFDTIAMEPDLKNKVKSDLESFLRAKQYYHRNGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVFDIDLNKIPSDSELKLLLLHTTPKSVVVIEDLDRFVAEKTARISVSGILNFMDGLITSCCAEERVMVFTMNTKEHVDPNLLRPGRIDVHIHFPLCDFSAFKTLANSYLGVKEHKLFPQVQEIFQNGASLSPAEIGELMIANRNSPSRAIRSVITALQTDGDGRGCGLMGKQKEEDEMDEPDGVVCGEGVNTVKDLRRLYSFFRFRVTRKSSSSNSSLPASPLR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1211 478 CDD AAA 227 349 - -
Pvu6g1211 478 Pfam Domain associated at C-terminal with AAA 37 118 IPR025753 -
Pvu6g1211 478 PANTHER BNAC04G00800D PROTEIN 20 442 - -
Pvu6g1211 478 Gene3D - 182 349 IPR027417 -
Pvu6g1211 478 Pfam ATPase family associated with various cellular activities (AAA) 231 349 IPR003959 GO:0005524|GO:0016887
Pvu6g1211 478 PANTHER BCS1 AAA-TYPE ATPASE 20 442 - -
Pvu6g1211 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 410 IPR027417 -
Pvu6g1211 478 SMART AAA_5 226 351 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1211 Pvu-Chr6 23090658 23092694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1211 - K08900 gmx:100776680 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1211 6 23090658 23092694 Pvu10g1215 10 38325473 38327550 PCT