Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1208 ATGGAAATCAACCAATCCGCGAAAGAGACCGTGATGGAAGAAGAGTTCGAGGACTTGCTGCCAGTGATGGCAGAGAAGCTGGATGTGGAGACCTTTGTGTCTGAGTTGTGTGGAGGTTTCAAGCTTCTGGCCGATCCAGAAACGGGTTTGATCAGTGGTGAGAGTTTGATGAGAAATTCAGCTCTATTGGGTATCGATGAGATGAGCAAAGAGGAAGCAGAGGCCATGGTTAGACAAGGTGATCTTGATGGGGATGGGAAGCTCAATGAGACTGAGTTTTGCATTCTTATGCTCAGGCTTAGCCCTGGGATCATGGAAGAAGCCGAGGCCTGGCTTCACAAGGCACTTCAACAAGAACTCACCAAATCCTCAACTTAA 378 0.4815 MEINQSAKETVMEEEFEDLLPVMAEKLDVETFVSELCGGFKLLADPETGLISGESLMRNSALLGIDEMSKEEAEAMVRQGDLDGDGKLNETEFCILMLRLSPGIMEEAEAWLHKALQQELTKSST* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1208 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 IPR044205 GO:0005509
Pvu6g1208 125 Pfam EF-hand domain pair 47 99 IPR002048 GO:0005509
Pvu6g1208 125 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Pvu6g1208 125 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Pvu6g1208 125 PANTHER CALCIUM-BINDING PROTEIN KIC 1 122 - -
Pvu6g1208 125 Gene3D - 13 125 - -
Pvu6g1208 125 SUPERFAMILY EF-hand 16 101 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1208 Pvu-Chr6 23073691 23074068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1208 5 120 EF-hand Containing Proteins AT2G46600 68.103 1.99e-54 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1208 K24345 - gmx:100787197 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1208 6 23073691 23074068 Pvu10g1209 10 38272595 38273757 PCT