Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1209 ATGGAAAGCAAGCAGCACAGCATGGAGACAGAGTTTGAGGACTTGCTGCCTGTGATGGCAGAGAAGCTTGATGTGGAGTCCTTTGTGTCAGAACTGTGTGGTGGTCTCAAGCTTCTATCAGACCCAGAAAAAGGTTTGATAACAAGTGAGAGTCTGAGGAGAAACTCAGCTCTTCTTGGTATAGAGGGCATGAGTATGGAGGATGCAGATGCTATGGTTAGACAAGGTGATCTTGATGGTGATGGAAAGCTTAATGAAACTGAATTTTGCATTCTCATGGTCAGGCTTAGCCCTGGAATGATGGAAGATGCTGAGTCATGGCTGGAAAAGGCAATTCATGAAGAACTTAGGAACTCCCCAACTTAG 366 0.4536 MESKQHSMETEFEDLLPVMAEKLDVESFVSELCGGLKLLSDPEKGLITSESLRRNSALLGIEGMSMEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIHEELRNSPT* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1209 121 ProSitePatterns EF-hand calcium-binding domain. 77 89 IPR018247 -
Pvu10g1209 121 PANTHER CALCIUM-BINDING PROTEIN KIC 4 118 IPR044205 GO:0005509
Pvu10g1209 121 Pfam EF-hand domain pair 43 95 IPR002048 GO:0005509
Pvu10g1209 121 PANTHER CALCIUM-BINDING PROTEIN KIC 4 118 - -
Pvu10g1209 121 ProSiteProfiles EF-hand calcium-binding domain profile. 64 99 IPR002048 GO:0005509
Pvu10g1209 121 SUPERFAMILY EF-hand 27 106 IPR011992 -
Pvu10g1209 121 Gene3D - 9 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1209 Pvu-Chr10 38272595 38273757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1209 8 118 EF-hand Containing Proteins AT2G46600 75.676 3.86e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1209 K24345 - gmx:100802677 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1209 10 38272595 38273757 Pvu10g1209 10 38272595 38273757 ECH
Pvu6g1208 6 23073691 23074068 Pvu10g1209 10 38272595 38273757 PCT