Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1189 ATGTCTTCAGCCGGTGTCACTACTCTTAGCCCGGTTCCCTCTGAACCATTGTTGTCACCAAAGGCATTCCCTTTCCCATCACATTTGTCTTTGGAAGATAAATCCATTTTCATATATCTCTCCTTTTCGGGTTCGTTGACTCCAATCCGTGTTATGGAGTGGGATACCATTGCGTCTGTGAAATTCAAAATCCGAAGGTGTGAAAGCCTTCCATTTTTAACAAACAAGCAGAAGTTGGTTTATGCTGGCCGAGAACTCGCGCGGAGTGATTCTCTGCTCAAGGACTATGGAGTAACCGGTGGCAATGTTTTGCATTTGATAATCAAACTGTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGCGGGAAGGAGTTCACGTTTCAGGTTGAAAGAGGTCGGGATGTTAGGTACATAAAGCGGCGGATTGCCAAAAGGGAAAAACAGTTTGATGATCCTGAGGAGCAGGAGCTTGTGTGCTATGGGGAAAGGCTTGATGACCAGAGGCTTATTGATGATATCTGCTGCAAGCATAATGATGCTGTGCTACGTCTGTTTGTGAGAAACAAGGATGTCAAAGTTCAGAGGAGACCCCTTGAGTTGTCCATTTTAGCAACAGATTTGATTGATGAGAAAAGAAACGATGTCAATGGAGAGACGTCTAGGAGGAATTATGATGTTGGTAAAGAAGATACTATTAGAAAGTCTGATGCCATTAGAAGAACTGTGCCGAGAAAGCCTCCCGACAGAGATTTTATTTTGGAGCCAGTTATTATTAACCCTAAAATTGAATTAGCTCCAGCTATTTGGAATATGGTGAATTCTACATATGATGGAGTTGAGAGTGGAAAATATCCAATCAGATCTGCAGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAGCAGGGCAAAAGTATGTGTCTGTTTTTAAGCCTATTGACGAAGAACCAATGGCCGTGAATAACCCTCGAGGTCTTCCACTGTCGTTAGATGGTGAAGGCTTAAAAAAAGGTACAAGAGTTGGTCAAGGTGCATTCAGGGAAGTTGCAGCCTATGTATTAGATCATCCATTGAGTGGGCGCCGCAAATTATTTGGTGATGAGACGGGCTATGCTGGTGTCCCTCCAACATTGATGATCAAGTGCTTGCATAAAGCATTTAACTATCCTAGAGAATTGACTCCTAAGATTGGCTCCTTGCAAATGTTTACAGAAAATAGTGGAAGTTGTGAAGATATGGGCCCTGGGGCTTTCCCAGTAAAGGAAGTACATAAAATTTCTGTTTTGGACATAAGACTGGCGAATGCTGATAGGCATGCTGGGAATATTTTGATCTGCAAAGAGGAAGACAATAACCAGTCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCTACAAGCTTTGAAGATTGTACCTTTGAGTGGCTTTACTGGCCCCAAGCTTGCCAGCCATACTCCCCAGAAACTATTGAGTACATAAAGTCACTGGATGCTGAAGAAGATATTGCCCTTTTAAAGTTTCACGGGTGGGATCTGCCGGTTGAATGTGCTCGCACTCTCAGGATCTCAACCATGCTTTTGAAGAAAGGGGTAGAGAGAGGGTTGACCCCCTTTGCCATTGGAAGCATGATGTGCAGGGAATCCTTGAACAAGGAATCTGTGATTGAAGAAATAGTACAAGCAGCCCTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTGGATGCTGTTTCCCAAATCATGGATCTGCGCCTCGATGAGATTGTCAGATCTCGTTTGTAA 1794 0.4337 MSSAGVTTLSPVPSEPLLSPKAFPFPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTIASVKFKIRRCESLPFLTNKQKLVYAGRELARSDSLLKDYGVTGGNVLHLIIKLSDLQVINVKTSCGKEFTFQVERGRDVRYIKRRIAKREKQFDDPEEQELVCYGERLDDQRLIDDICCKHNDAVLRLFVRNKDVKVQRRPLELSILATDLIDEKRNDVNGETSRRNYDVGKEDTIRKSDAIRRTVPRKPPDRDFILEPVIINPKIELAPAIWNMVNSTYDGVESGKYPIRSAEGTGGAYFMLDSAGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYVLDHPLSGRRKLFGDETGYAGVPPTLMIKCLHKAFNYPRELTPKIGSLQMFTENSGSCEDMGPGAFPVKEVHKISVLDIRLANADRHAGNILICKEEDNNQSVLIPIDHGYCLPTSFEDCTFEWLYWPQACQPYSPETIEYIKSLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGVERGLTPFAIGSMMCRESLNKESVIEEIVQAALDSVLPGTSEATFLDAVSQIMDLRLDEIVRSRL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1189 597 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 594 IPR044571 -
Pvu6g1189 597 CDD Ubl_ubiquitin_like 116 186 - -
Pvu6g1189 597 ProSiteProfiles Ubiquitin domain profile. 116 173 IPR000626 GO:0005515
Pvu6g1189 597 SUPERFAMILY Protein kinase-like (PK-like) 428 592 IPR011009 -
Pvu6g1189 597 Gene3D - 115 200 - -
Pvu6g1189 597 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Pvu6g1189 597 Pfam Ubiquitin family 116 188 IPR000626 GO:0005515
Pvu6g1189 597 SUPERFAMILY Ubiquitin-like 41 111 IPR029071 -
Pvu6g1189 597 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 594 - -
Pvu6g1189 597 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 283 576 IPR000403 -
Pvu6g1189 597 Gene3D - 30 114 - -
Pvu6g1189 597 SMART ubq_7 114 188 IPR000626 GO:0005515
Pvu6g1189 597 SMART ubq_7 36 109 IPR000626 GO:0005515
Pvu6g1189 597 Pfam Phosphatidylinositol 3- and 4-kinase 292 541 IPR000403 -
Pvu6g1189 597 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Pvu6g1189 597 SUPERFAMILY Ubiquitin-like 110 182 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1189 Pvu-Chr6 22888862 22891524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1189 33 591 Acyl Lipid Metabolism Gene Families AT5G24240 55.300 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1189 - - gmx:100791631 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1189 6 22888862 22891524 Pvu10g1194 10 38008280 38011427 PCT