Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1176 ATGGGCGAGCATGAGGGTTGGGCACAGCCACCAAGTGGGATATTGCCTAATGGCTTGATGCCCAATGACGCCGCATCGGTGATGCGAGTGCTTGACATGGATCGGTGGTTGAAGGCTGAGGAAAGGACTGCTGAGCTAATTGCCTGCATTCAGCCCAATCCGCCCTCCGAGGAGCGCCGTCATGCTGTTGCGGACTATGTGCAGCGGTTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACCTATTTACCTGATGGAGATATTGACCTGACAGCATTCAGCAAGAACCAAAATCTGAAGGATGCGTGGGCACACCAGGTTCATGACATGCTCCAAAATGAGGAAAAGGATGAAAATGCAGAGTTTCATGTCAAAGAAGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTGGACATTTCATTTAACCAGCTTGGAGGATTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATTTGATTAACCAAAACCATTTATTCAAGCGTAGCATTATACTTATAAAAGCCTGGTGTTACTATGAGAGTCGAATACTTGGTGCCCACCATGGACTTATCTCAACTTACGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAACTCCTTTTCTGGACCTCTTGAGGTATTGTATAGGTTTTTGGAGTTTTTTAGTAAGTTTGATTGGGATAATTTCTGTGTAAGTCTATGGGGTCCTGTACCCATCAGTTCACTTCCAGATGTGACAGCTGAACCTCCTCGGAAAGATGGTGGAGATTTATTGCTCAGCAAGTTATTTCTTGATGCCTGCAGCTCAGTTTATGCTGTTTTCCCTGCTGGCCAAGAAAATCAGGGGCAACCATTTACTTCCAAGCATTTCAATGTTATTGATCCTTTGCGGGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTTTAGAATTCGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCTAGATTGCTTGACTGCCCAAAGGAGGATTTGTTTTTGGAAGTTAATCAATTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTCCTAGTAATGACTTATGGCATTTGACGATATCTAATCATGACCAATCACACGGGTCCAAGAATTTCCAGAAAAATAGCAATAAAACTGAGAATACCTATAATCAAGAATTTCAAGTGAAAGGGGTGCATGCTTCACAGAGTGTGCTATCTCAACACAGTATATTGTCCTCTAAAAGTTTATCTAAGAGTAGTGGTGATTCTACAGCTAACCAAAATAATGCAAGGGATTTTGATCAGGTCAAAAGGGAAGCTAACTGTAATCAAGGTATTCGAGTTGATAAAGGACAGAGAAATGCTAAACCAAATAACCCATTCAATGATGTCCCAGGAAGGCTTTTGTTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCTTACGGTGAAATTCCTAGGCAAGGAAGACATACAAAAGCCCCAGAAAGTGGGAAAGGACCAACTTCCTCTGCAAAGTTGGAGAATAGTCACAGGAAGCATCTTGATTCTGACATCCCTGCTAGTTATGCGGTTAGAGTTGACAATTCATCTGGTAGGCAAATAATATCACATCAGGTTCATGATAGTGGTGCTGATTCAAACAATGGCTCAAATAGTTATGATAATGAATCTGGCCCTGGAATTGTGGGTGAAGAGTTTGCTTCTGTTGCTGGAGTAGGTGGAACACATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCCCCCACAACTGAAGGTTTCAGTGGTCAGAATCAAATACCAGTGAATTTAGCTCCAGGTCACCTACCACTTCCACTTTCCCCTTCCATTCTTGCATCAATGGGATATGCTCATAGGAACATGGGTAACATTCCCTTAATTGAGTCCTTCAATTGGGGTACTAATGTGCAATTTCCCCAAGGTTTAGTCCCTTCCCCGTGGACTTCATATTTCCCTGGCATAGGATTGACCTCAAATCCGGAAGATTTAATTGAAACTGGCAATGAGAATTTCAATTCTGTTGAAATGAGTCCAGCAGAAGCTGATAAAGATTTCTGGCATGAGCAAGAAAGGGCTGCTGCTAGGGGGATTGATGTAGATAATGGAAATTTTGAAATGCTTCCAGATGATAAGCGACAGTCAACTTCTGGTGGTTATAACTTTATACCATTATCTCATGTTGGCAGCTCTAGTAATTCTGCTATACTTCAGCCAACATTTACTAAAGAAAATCGAGGTTCTACAAGAGAAGAGCAAATTGATAGTCCTAAATATCAAGGTGGCAGAGGAAATGGGGCATATTTTGATGATAGAACTGCAAATCCTAGGTTGCCCAGTGAACCGTCTTCAAGCTCATTTAGGAGTAAGACGTCTTCAGAAAGCTCTTTGGAGGGACCATCTGCAAAATCTTCAAAATCAACTAGGGAAAAAAGAGGGAAGAAAAGTACTTCCTCAGTGCCATCGGCTGCTTACGGTAAGGGCAAGAATGTCTCAGATATTTCATGTAATCTTGTGGATGATGAAAACAGACAATGGACAACTCTGTCAACTACAGCATCTGATATGTCAGATAAAAGCACTGGGCCACTGGCGGTTGCTCCTATGCATGTTCCTAAGCAGCCAGTGTCTAGTTCTGAAGTTGTTCGGACTAGTGGATCAGATTCTGTGTTACCCATGGCTCCAGTACTTATAGGTCATGGTTCTCGCCAAAGAACAGGGGATAATTCTGGGGCTGTTCCATTTGCGTTCTATCCCACAGGGCCACCAGTACCATTTGTTACCATGCTCCCCTTATATAATTTTCCCACTACTCAATCTTCTCACACACCAGCAAGCAATTTCAATGTGGAAGATGCAGATAAGAATGACCGCTGTCAGAATTTTGATCCATCTGAGGTGTATGATCAGCCTGAGGTGCTGAGCTCTTCCAATTCTGTGAGAAGAGCTGCTATTGACACATCAGAGCCCAAGCCTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAGTATGGGCGAATTTGTCAAAATTCACGCCATCCTGATTCAGTTAACTATCCTTCATCTGTTGTGGTACCTCCTGTTTATTTGCAGAGTCATTTTCCCTGGGATGGTCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTACGAACTATGGGCCACACCTAGTGCCTGTTGCTCCTCTCCATTCAGTTTCCAACAGACCAGTCAATATTTACCCACGATTTATAGATGAGATACCACGGTATCGAAGTGGGACAGGAACCTACCTGCCAAATCCTAAGGTTTCTTCTCGGGATCGACATTCTACAAGCACTAGAAGGAGTAATCACAACTATGACAGAAATGATCAGCATGGTGACAGAGAAGGGAATTGGAATGTTAACTCAAAGTTGAGAACAAGTGGGCGTAGCCATTACCGCAGTCAAGCTGAGCGAACTAGCTCAAGGCAAGAAAAGTTGGCAATGAGTGAGAGCCATTCTGAAAGACCATGGGGTTCACATAGACCTGATTCTTTTCTTTCTCACCAGAATGGTCCTGTCCGGTTAAATTCCTCGCAAAACAGTTCATCAAATTTGGCTTATGGAATGTGCTCTCTACCAGGCATGCGCCCCAGTGGGATATCATCAAATGGACCAACAATTCCACCTGTTGTAATGTGGTATTCATATGATCATAATGCTAGCTACAGCACACCAGCAGAACAGCTCGAATTTGGAACTATGGGACCTATGGGTTTCCCCAGTGTCAATGAAGTATCACTGCTCAACGAGGGAAGCCAAACTGGTGGAGCATTTGAGGAGCAAAGCTTTAATGGTGGCACTGCTCAACAATCATCACCCGATCAACCTGCTTCACCCAAGTTCCGAAGGGGGCTTTGA 4011 0.4336 MGEHEGWAQPPSGILPNGLMPNDAASVMRVLDMDRWLKAEERTAELIACIQPNPPSEERRHAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDAWAHQVHDMLQNEEKDENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFSGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPAGQENQGQPFTSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPKEDLFLEVNQFFMNTWVRHGTGQRPDAPSNDLWHLTISNHDQSHGSKNFQKNSNKTENTYNQEFQVKGVHASQSVLSQHSILSSKSLSKSSGDSTANQNNARDFDQVKREANCNQGIRVDKGQRNAKPNNPFNDVPGRLLFARTCSSPELTDSYGEIPRQGRHTKAPESGKGPTSSAKLENSHRKHLDSDIPASYAVRVDNSSGRQIISHQVHDSGADSNNGSNSYDNESGPGIVGEEFASVAGVGGTHMMHQEEQDLLNMMTSPTTEGFSGQNQIPVNLAPGHLPLPLSPSILASMGYAHRNMGNIPLIESFNWGTNVQFPQGLVPSPWTSYFPGIGLTSNPEDLIETGNENFNSVEMSPAEADKDFWHEQERAAARGIDVDNGNFEMLPDDKRQSTSGGYNFIPLSHVGSSSNSAILQPTFTKENRGSTREEQIDSPKYQGGRGNGAYFDDRTANPRLPSEPSSSSFRSKTSSESSLEGPSAKSSKSTREKRGKKSTSSVPSAAYGKGKNVSDISCNLVDDENRQWTTLSTTASDMSDKSTGPLAVAPMHVPKQPVSSSEVVRTSGSDSVLPMAPVLIGHGSRQRTGDNSGAVPFAFYPTGPPVPFVTMLPLYNFPTTQSSHTPASNFNVEDADKNDRCQNFDPSEVYDQPEVLSSSNSVRRAAIDTSEPKPDILNGDFVSHWQNLQYGRICQNSRHPDSVNYPSSVVVPPVYLQSHFPWDGPGRPQSANVNLFTQLTNYGPHLVPVAPLHSVSNRPVNIYPRFIDEIPRYRSGTGTYLPNPKVSSRDRHSTSTRRSNHNYDRNDQHGDREGNWNVNSKLRTSGRSHYRSQAERTSSRQEKLAMSESHSERPWGSHRPDSFLSHQNGPVRLNSSQNSSSNLAYGMCSLPGMRPSGISSNGPTIPPVVMWYSYDHNASYSTPAEQLEFGTMGPMGFPSVNEVSLLNEGSQTGGAFEEQSFNGGTAQQSSPDQPASPKFRRGL* 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 438 491 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 812 838 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 776 871 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1301 1328 - -
Pvu6g1176 1336 Gene3D - 162 358 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1181 1212 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 566 588 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 566 583 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 503 545 - -
Pvu6g1176 1336 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1334 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1126 1232 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 438 455 - -
Pvu6g1176 1336 PANTHER - 1 1334 - -
Pvu6g1176 1336 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1143 1169 - -
Pvu6g1176 1336 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1214 1232 - -
Pvu6g1176 1336 MobiDBLite consensus disorder prediction 1301 1336 - -
Pvu6g1176 1336 CDD NT_PAP_TUTase 59 166 - -
Pvu6g1176 1336 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1176 Pvu-Chr6 22794309 22801591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1176 - - gmx:100809742 1865.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1176 6 22794309 22801591 Pvu10g1176 10 37695253 37703058 PCT