Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1176 ATGGGGGAACATGAAGGTTGGGCACAGCCACCAAGTGGGCTATTGCCTAATGGTTTGTTGCCCAATGAAGCTGCCTCCGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAAGCCGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCACCCTCTGAGGAGCGCCGGAATGCGGTTGCTGACTATGTCCAACGGCTGATCATGAAGTGCTTCCCTTGCGAGGTGTTCACCTTTGGGTCGGTGCCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGAGACATGGGCACATCAGGTTCGGGACATGCTGGAAAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAGTATATCCAGGCCGAAGTAAAAATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGTTTGTGTACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGTATTATTCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTCGGTGCTCACCATGGACTTATCTCAACTTATGCCTTAGAGACCTTGGTTCTTTACATTTTTCATGTTTTCAACAATTCTTTTTCTGGACCACTTGAGGTGTTGTATCGATTTTTGGAATTCTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTGTGGGGTCCAGTACCTATTAGTTTGCTCCCGGATGTGTCAGCCGAACCTCCTCGAAAAGATGGTGGAGATTTACTTCTCAGCAAGTTATTTCTAGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCATTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGTCGTAGTGTAAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTGACTAGATTACTTGATTGCCCTGAGGAGGAATTATTTTCTGAGGTGAATCAGTTCTTTTTGAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATTGACTTACAGCGTTTGAGTTTGTCCAGTCATGACCAATTACAGAGGTCTGACAATCTGCAGAACAATAACCATAAAATTGATAATGCCTCCAATCATGAATCTACTGAAGGGGAACATGTCTCACAAAGTGTTCTATCTCAGTATAGTAATTTATTATCTGGAAAGACATCTGGAAATGTTGTTTCTACAGTGTCACATACTCAGAATCAAAAGAATTATGGAAGCCAAAATAATTCAAGGACCTTTGATCATGTTAGGAGGGAAACTAATTCTAATCAAGGTGCTCATTTTGATAAAGGTCAGAGAAATGTTAAAGCTGACCAAGTGAGTGATGTTCAGGGAAGGTTTCTGTTTGCCAGGACACGTTCTAGCCCTGAGCTGACGGACTCATATGGTGATGTTCCAATCCAAGGAAGACATACAAAAGCAACAGAAAATAGTAAAGGCCAGAATTCCTTTGTGAAGTTGGAGACTAGTCGAAAGAAGAATGTTGAACCTGATGTAGCTATAAGAAAGGACGAGTCATCTGTAAGGCACATCTCATCTCATCGAGCTCTTGAAAATGCTGCTGATTCAAACAGTAATCCTGAGGAGTCAAACTCAGGTGTCATAGGTGAAGAGTTTGCATCTGTTTCAGGTGCAGGAGGAATGCAGATGATGCATCAAGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCACAGCTCAGGGTTTCAGTGGTCAGAATCATGTTCCAATGAATATTGCACCTGGTCACCTACCATTTCCCTTTCCACCTTCCATTCTTGCGTCAATGGGATATGGTCAGAGAAACATGGGTAGCATTCCCTTTATTGAGGCTCCTTGGGGTGCAAATATGCAATTTCCTCAAGGCTTCATCCCGCCATTGACTCCATATTTCCCTGGCATAGGAATGACCTCAAGTCCTCAAGATTTACTTGAAACTAACCATGAGAATTTCAATTCAGTCGAGGCGAATATAACAGAAGCTGATAATGATTATTGGCATGAACAGGAAAGGGGTTCTGCAAGTGAGGTTGAAGTTGATAATGGAAATCTTGAAATGCCCCCAGAGGATAGGCAACAGTCTACTTCAGGCAGTTACAACTCGGCCCCATTGTCTCGGGTAGGCAGCTCCAACAGTAACAGTTCTGCTGGAGTTCAGCAGAAGTTTACTAAAGAAAACCAAGGTTCAACCAGAGAAGAGAATATTGACAATTTTCATTTTCAAGATGGCCGAAGAAATGAGGTTTATTTTGATGATAGAACAGCAATTTCAGAGTTATCCAGTGCACCTCCTTCGAGCTCCTTCAGGAGTAGGACCCCTTCTGAAAGCTCTTGGGATGGTTCATCAGTTAAATCCTCAAAATCAACAAGGGAGAGAAGGGGGAGGAAAAATACTCCCTCAATGCCATTTCAAAATCCTGTTTATGGGAAGGGTAAGAATGTTTCAGAAATTTCATCTAATAGAGTAGATGATGAAAACAGAGAGTGGACTCCTTTGTCAACGGTGCCATCTGATATGCCAGAAAGAAGCACTTGGCCCACATCTGTTTCTTCCATACATGTTCCAAGGAATCAAATATCTAGTTTTGAAACTGCTCAGACTAGTGGACCAGATACTCCACTCCCTATAGCTCCAGTGCTTATAGGTCCTGGTTCTCGCCAAAGAGCAGCTGATAATTCTGGGGTTCTTCCGTTTACATTCTATCCTACAGGGCCACCTGTTCCCTTTGTCACGATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCAACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCTGAGGGGTATGAACACCCTGAGGTGTCAAGCCCTTCCAATTCTATTGCAAGGGTGGCTATCGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGTCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACACGCGCCATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGTCCTGGAAGACCAATTTCTGGTAACATGAATATTTTTAATCAGCTTATGAGCTATGGGCCACGTCTGGTTCCTGTTGCTCCTCTCCAGTCAGTTTCTAATAGACCTACCAATATTTACCAACGTTATGTAGATGATATGCCACGGTATAGAAGTGGGACTGGAACCTACCTGCCAAATCCGAAGGTGTCTGCTCGGGATCGGCATCCCACAACTACCAGAAGGGGAAATTACAATTATGATAGAAATGACCATCATGGTGATAGAGAAGGGAATTGGAATACTAACTCAAAATTGCGAGGAACTGGACGTGGCCATAATCGCAACCAAATGGAGAAGTCCAACTCAAAGCCAGAGCGGTTGTCTACTACTGAGAGCCGTGCGGAGAGACCATGGGGTTCACATAGGCATGACACCTTCATTCCTCACCAGAATGGTCCAGTCCGCTCAAATTCTTCGCAGAGTAATTCTTCCAATGTAACTTATGGAATGTATCCTATGCCAGCCATGAACCCAAGCGGAGTCTCATCAAATGGTCCAATGCAATCTGTTGTAATGTTTTATCCTTTTGATCACAATTCTGGCTACGGTTCACCCGCAGAGCAGCTTGAGTTTGGGACTTTGGGACCAATGGGGTTCTCAGGTGTCAATGAGCTGTCACAGGCAAATGAGGGAAGTCAATCTAGTGGAGCACATGAAGAGCAAAGGTTTCGTGGTGGTCACACCCAACGGTCTTCACCAGATCAACCTTCCTCACCTCATGTCTCAAGGGCCCCCTAA 3993 0.4348 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCEVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKETWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFSGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISLLPDVSAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLTRLLDCPEEELFSEVNQFFLNTWDRHGSGERPDVPSIDLQRLSLSSHDQLQRSDNLQNNNHKIDNASNHESTEGEHVSQSVLSQYSNLLSGKTSGNVVSTVSHTQNQKNYGSQNNSRTFDHVRRETNSNQGAHFDKGQRNVKADQVSDVQGRFLFARTRSSPELTDSYGDVPIQGRHTKATENSKGQNSFVKLETSRKKNVEPDVAIRKDESSVRHISSHRALENAADSNSNPEESNSGVIGEEFASVSGAGGMQMMHQEEQDLLNMMASPTAQGFSGQNHVPMNIAPGHLPFPFPPSILASMGYGQRNMGSIPFIEAPWGANMQFPQGFIPPLTPYFPGIGMTSSPQDLLETNHENFNSVEANITEADNDYWHEQERGSASEVEVDNGNLEMPPEDRQQSTSGSYNSAPLSRVGSSNSNSSAGVQQKFTKENQGSTREENIDNFHFQDGRRNEVYFDDRTAISELSSAPPSSSFRSRTPSESSWDGSSVKSSKSTRERRGRKNTPSMPFQNPVYGKGKNVSEISSNRVDDENREWTPLSTVPSDMPERSTWPTSVSSIHVPRNQISSFETAQTSGPDTPLPIAPVLIGPGSRQRAADNSGVLPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDSSQNFDSSEGYEHPEVSSPSNSIARVAIESSEHKPDILNSDFVSHWQNLQYGRFCQNTRHPSPVMVPPVYLQGRYPWDGPGRPISGNMNIFNQLMSYGPRLVPVAPLQSVSNRPTNIYQRYVDDMPRYRSGTGTYLPNPKVSARDRHPTTTRRGNYNYDRNDHHGDREGNWNTNSKLRGTGRGHNRNQMEKSNSKPERLSTTESRAERPWGSHRHDTFIPHQNGPVRSNSSQSNSSNVTYGMYPMPAMNPSGVSSNGPMQSVVMFYPFDHNSGYGSPAEQLEFGTLGPMGFSGVNELSQANEGSQSSGAHEEQRFRGGHTQRSSPDQPSSPHVSRAP* 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 569 584 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1138 1164 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1284 1330 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 740 778 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1313 1330 - -
Pvu10g1176 1330 Gene3D - 162 360 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 811 837 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1285 1304 - -
Pvu10g1176 1330 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 974 1014 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 883 902 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 722 793 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 779 793 - -
Pvu10g1176 1330 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Pvu10g1176 1330 Pfam Nucleotidyltransferase domain 78 145 IPR002934 GO:0016779
Pvu10g1176 1330 CDD NT_PAP_TUTase 59 166 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1176 1208 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 557 586 - -
Pvu10g1176 1330 PANTHER - 1 1328 - -
Pvu10g1176 1330 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 394 426 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 511 534 - -
Pvu10g1176 1330 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1328 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 394 411 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1122 1231 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 1215 1231 - -
Pvu10g1176 1330 MobiDBLite consensus disorder prediction 811 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1176 Pvu-Chr10 37695253 37703058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1176 - - gmx:100809742 2352.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1176 10 37695253 37703058 Pvu10g1176 10 37695253 37703058 ECH
Pvu6g1176 6 22794309 22801591 Pvu10g1176 10 37695253 37703058 PCT