Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1175 ATGGCATACACTGCGGTTGCTATGCCTACCTCTCCAGCAGCTAACACTGCAACTATGGACATTGCAAAGGAGCATAATGGTCTTCGTCGCTCCCAATCCAGCAAAGAACTATGCACAAGTTCTATTATGCGGAGGTCTTATTCTGACAACCACCTATGTTGCTCCATCAATTGCGTACAAGGCACATCAGTTACACCAAAACTTAAGAGCAATCGGTCAACGGGAATTTCCCCGTTTCAATTTTCAGGCTCCATTCTTCCAAATTCACTGCGCTCCTTCTTGTTTGACCCAGAAACTAGCAAGGATATAGGTGTGGGGGAGAAGGAGGTAAGCATTGAGGAAAACATGGTGGAAAGAAGCAAAGAAGAGAGAGTAAATAGAGCCAACTGGGTGGAGAGGCTTATGGAAATCAAGAAACATTGGCGAAATAGACTGCCAAAAGAAAGCCTGGATCCAGATGACATATGCCAAGACAATAATTACGAGGAATGTGAATGTAATGGAGATGATGGTGTTTGCGTGGTGGGTGAAGACGAAGATGAGGAGGAAGTGACATATGATCGCGATTCATTCTCAGAATTTCTGGTTCAAGTGCCATGGTCTGATACCCAATTGTACTCTCAACTTGCTTTCCTGTGCAACATGGCCTATGTAATTCCTCAAATCAAGGCTAAGGACTTGCGACGATACTACAACCTTCAATTTATAACATCTTCTTTAGAGAAGAAGGCCGAAGTGGCTAAGTTAAAAATGAAACTTGACCAGGACTCCACTTGCGTTCCTTTAGATGACTCGGTAGCCTCTCAAGGTATCACAAAGAAAGGCAAAGGAAATGCACAGAAGCATCAAATCCAACTTGCTTATGATATCGCTACCTCAGCTGCCTCGTATGTTCAATTACGAGCTAAGGACCTTTTGTACCTTGCTGCTAAGTCACAAAAGAGTGAAAATGAAGAGCCTAACCAAGGAGGAGAGTCACCTGGAGAAGAGGTGGAAGGCACTTCGCGAGGCTACAAATCAGAGGTTGCTGCTTATGTAGCAGCATCCACAATGACCGCAGTGGTTGCAGCAGGGGAGAAGGAAAAACAAGAAGCAGCAAATGACCTCCAGTCACTTCATTCCTCACCTTGTGAATGGTTTGTTTGTGATGATCCCAGCAATCACACTCGATGCTTTGTGATTCAGGGGTCAGACTCTCTGGCATCTTGGCAAGCAAACCTCTTTTTTGAGCCTACAAAATTTGAGGGTACAGATGTACTTGTTCATAGAGGAATTTATGAAGCTGCAAAAGGAATATACAAGCAATTCATGCCGGCAATAATGGAGCATTTGAAGAGACACGGGGATCGTGCAAAGCTTCAATTCACTGGGCATTCCCTCGGGGGGAGTCTCTCTCTATTGGTTCATCTGATGCTTTTGACTAACAAGGTTGTGAGTCCCTCCACTCTTCGACCAGTTGTGACTTTTGGCTCACCATTTGTATTCTGTGGAGGCCATCAAATTATCCATGAACTAGGCATAGACGAGAGCCACATCCACTGTGTGATGATGCATAGAGATATTGTTCCCAGGGCCTTCTCCTGCAATTACCCAAATCATGTAGCTGTAGTCCTTAAGCGCTTAAACAGCTCCTTTCGCTCACATCCTTGTCTGCTGAAAAATAAGCTGTTGTACTCACCACTGGGTAAAATATTCATTCTCCAACCCGATGAGAAGACGTCTCCTCCACATCCTTTACTCCCTCGAGGAAGTGCCTTCTATGCCCTGGACAATACTAAACGTGGATACTCTCCAAGTGTTCTCAGAACCTTCCTGAATCAACCACACCCCATTGACACACTAAGTGACCCAACAGCATATGGTTCAGAAGGCACAATTCTGAGAGACCACGATTCCAGTAACTACCTTAAAGCCGTCAATGGAGTCTTGAGGGAACATTCTAAGATTCTCGTTCGCAGAGCAAGTAAGCAAAGGATTAATCAGTTATGGCCACTTTTGACATCACCATCTCCACACTCATGGAGCCATGAACAGAACTTAGAGAGATGCAGCTTGATGACAAAGGAGATAGTGACAGGGGTTTGA 2085 0.448 MAYTAVAMPTSPAANTATMDIAKEHNGLRRSQSSKELCTSSIMRRSYSDNHLCCSINCVQGTSVTPKLKSNRSTGISPFQFSGSILPNSLRSFLFDPETSKDIGVGEKEVSIEENMVERSKEERVNRANWVERLMEIKKHWRNRLPKESLDPDDICQDNNYEECECNGDDGVCVVGEDEDEEEVTYDRDSFSEFLVQVPWSDTQLYSQLAFLCNMAYVIPQIKAKDLRRYYNLQFITSSLEKKAEVAKLKMKLDQDSTCVPLDDSVASQGITKKGKGNAQKHQIQLAYDIATSAASYVQLRAKDLLYLAAKSQKSENEEPNQGGESPGEEVEGTSRGYKSEVAAYVAASTMTAVVAAGEKEKQEAANDLQSLHSSPCEWFVCDDPSNHTRCFVIQGSDSLASWQANLFFEPTKFEGTDVLVHRGIYEAAKGIYKQFMPAIMEHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLTNKVVSPSTLRPVVTFGSPFVFCGGHQIIHELGIDESHIHCVMMHRDIVPRAFSCNYPNHVAVVLKRLNSSFRSHPCLLKNKLLYSPLGKIFILQPDEKTSPPHPLLPRGSAFYALDNTKRGYSPSVLRTFLNQPHPIDTLSDPTAYGSEGTILRDHDSSNYLKAVNGVLREHSKILVRRASKQRINQLWPLLTSPSPHSWSHEQNLERCSLMTKEIVTGV* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1175 694 CDD Lipase_3 343 531 - -
Pvu6g1175 694 Pfam Lipase (class 3) 392 529 IPR002921 GO:0006629
Pvu6g1175 694 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 694 IPR043367 GO:0008970
Pvu6g1175 694 SUPERFAMILY alpha/beta-Hydrolases 375 566 IPR029058 -
Pvu6g1175 694 MobiDBLite consensus disorder prediction 313 334 - -
Pvu6g1175 694 Gene3D alpha/beta hydrolase 334 554 IPR029058 -
Pvu6g1175 694 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 1 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1175 Pvu-Chr6 22786320 22791167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1175 1 668 Acyl Lipid Metabolism Gene Families AT3G61680 55.045 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1175 - - gmx:100790575 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1175 6 22786320 22791167 Pvu10g1175 10 37685670 37689483 PCT