Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1175 ATGTCTTATTCTGCAGTTTCCATTCCAACGACCTCTACAACTTCCTCCACAACAATGGATATCACAAAAGAGAATAAAGTGTTTCTCCACTCACTCTCCAACAAAGGCTTATGCAACCATTCAACAATCACGAGGTCTCACTCTAGCAATCTTCTATGCTGCTCCTCTAACCGCTTCAGAGGAACGTCAATGGAACCAAAGCATAAAAGCAGGCACTCCATAGTAGTTTTTCCACTTCAACTTTCAGTCTCCATTCTTCCAAATCCACTTCGCTCCTTCTTGTTTGACCCAGAAACGAGGAGGGAAATGAACATGGGGCAGAAGGGTATCAATCTTAAGGAAAACATGGTGGCAAGCACCGCAGAAGTGACTATAAATAGAGCCAACTGGGTAAAAAGATTAACCGGAATTAAGACTTATTGGAAACGGCCTGAAGAGAGCATGGATTCAGATATAGTATCTAAACACGATAATGAGTGTGATCGTGATGAAGATGATAATGTTTGTGTGGCAGGTTATGAAGAAGGAAATGGAAAAGAGGAAGATGGACAAGAAGTGACATTTGATCGTGACTCATTCTCAAAATATCTTGTCCCTGTTCCTTGGTCTGATACCAAACTGTTCTCGAAGCTGGCTTTCCTCTGCCACATGGCTTATGTCATACCACATATAAAGGCTAAGGACTTGGGGAGATACTATGGTCTTCAATTCGTTACATCATCTTTGAAAAAGAGAAAGAAAAAGAAAGGAGATGTGACTAAGAATAAAGCAAAACTTGATCAGGACTCCATTTGTGTGCCTATGGATGCTTCAGTAGCTTCTCAAGATGGTTCAGAGAAGGGTGATCATAATGAAGAGAAGCATCAAATGAAGCTTGCATATGATCTTACTGCCTCAGCTGCCTCTTATCTCCAATCACGTGCTAAGGACCTTTTGTCTCTTGCCTCTAAGTCAAAGCAGAATAGTGGCAATGAGGACTTCAATGGAAGAGAAGACTCACCTCATGAGGAGGCTGATGAAACTCCACAGGTTGACAAGTCCAAGTTTGGAGTTAATGTTGCAGCATTAACTATGACTGTTGTGGCTGCAGCAGGATCAGCAATGGACCTTCAGTTACTTCGTTCCTCGTCTTGTGAATGGTTTGTTTGTGATGATCCCAACACGCACACTCGATGCTTTGCCATTCAGGGATCTTATTCCGTGGCATCATGGCAGGCAAACCTCTCATTTGAGCCAACTACATTTGAGGACACAGATGTTCTTGTTCACAGTGGAATATATGAAGCTGCCAAGGGAATATATGAGCAATTCATGCCAGAAATAATGGACCATTTAAAGAGACATGGAGATAGTGCAAAGCTTCAATTCACTGGACATTCCCTAGGGGGAAGTCTCTCACTTTTGGTGTATTTGATGCTATTGACTAGGAAGGTTGTGAGTCCCTCAACTCTTCTACCAGTAGTGACTTTTGGTTCACCATTTGTGTTATGTGGAGGCCAAAAATTACTCAATGAGCTTGGCCTGGATGATAGCTTCATTCACTGTGTAATGATGCATAGAGATATTGTTCCCAGGATCTTCTCATGCAGTTTCCCTAACCATGTTATAACTGTCCTTAAGCGCTTAATAAAAGGCTCATTTGTATCACATCCTTGTCTGATGGAAAAGAAGCTATTGTACTCGCCATTGGGTAAAATATTCATTCTCCAACCAGATGAGAAAACATCTCCTCCACATCCTTTACTCCCATCAGGAAGTGGATTCTATGTTGTAGACAGTAGCAGATGTGGATACTCTCCAATTGTTCTAAGAACATTTCTCAATCAACCACACCCCATTGAAACACTAAGCAATCCAAAAGCTTATGGCTCAGATGGCACAGTTTTAAGAGACCATGATTGTAACAACTATCTTATAGCAGTGAATGGAGTTTTGGCACAAAATTCAAAGATTGTTGTCAGGACAAGGAGATCACAGCAGCCACGAAAAATATTTAAGAGAAAGATGAGAAAGTAA 2016 0.4137 MSYSAVSIPTTSTTSSTTMDITKENKVFLHSLSNKGLCNHSTITRSHSSNLLCCSSNRFRGTSMEPKHKSRHSIVVFPLQLSVSILPNPLRSFLFDPETRREMNMGQKGINLKENMVASTAEVTINRANWVKRLTGIKTYWKRPEESMDSDIVSKHDNECDRDEDDNVCVAGYEEGNGKEEDGQEVTFDRDSFSKYLVPVPWSDTKLFSKLAFLCHMAYVIPHIKAKDLGRYYGLQFVTSSLKKRKKKKGDVTKNKAKLDQDSICVPMDASVASQDGSEKGDHNEEKHQMKLAYDLTASAASYLQSRAKDLLSLASKSKQNSGNEDFNGREDSPHEEADETPQVDKSKFGVNVAALTMTVVAAAGSAMDLQLLRSSSCEWFVCDDPNTHTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGIYEQFMPEIMDHLKRHGDSAKLQFTGHSLGGSLSLLVYLMLLTRKVVSPSTLLPVVTFGSPFVLCGGQKLLNELGLDDSFIHCVMMHRDIVPRIFSCSFPNHVITVLKRLIKGSFVSHPCLMEKKLLYSPLGKIFILQPDEKTSPPHPLLPSGSGFYVVDSSRCGYSPIVLRTFLNQPHPIETLSNPKAYGSDGTVLRDHDCNNYLIAVNGVLAQNSKIVVRTRRSQQPRKIFKRKMRK* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1175 671 MobiDBLite consensus disorder prediction 324 344 - -
Pvu10g1175 671 Gene3D alpha/beta hydrolase 339 549 IPR029058 -
Pvu10g1175 671 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 663 IPR043367 GO:0008970
Pvu10g1175 671 MobiDBLite consensus disorder prediction 317 345 - -
Pvu10g1175 671 CDD Lipase_3 344 530 - -
Pvu10g1175 671 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 1 663 - -
Pvu10g1175 671 SUPERFAMILY alpha/beta-Hydrolases 376 528 IPR029058 -
Pvu10g1175 671 Pfam Lipase (class 3) 393 529 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1175 Pvu-Chr10 37685670 37689483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1175 5 660 Acyl Lipid Metabolism Gene Families AT3G61680 48.733 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1175 - - vra:106773723 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1175 10 37685670 37689483 Pvu10g1175 10 37685670 37689483 ECH
Pvu6g1175 6 22786320 22791167 Pvu10g1175 10 37685670 37689483 PCT