Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1168 ATGAGGGAAACGAGGTCTGATTTGAAGCCATTATCCGTACAGAAGCACAACTATCGTCATCACCATGTCTTCCTTAAGTTGGCAGTGTCGTGTCTCTTGGTGGGTCTCATTATTCGCCTCCTCCTCACCGATTCCTTCAGCTTTTCATCTGTTGTGCACAATCCTCCCCCTCTTGCAAATGCAATAGCACACTCACCCTTTCTTTCTTTTCCGCCTCCGCCATCTTATTCTGTTGATTTTCCTGTAAACCAGACCCAAACATCTCCCCAAGATGCAGTGGAGTGTGATCTTTTTGTGGGAGATTGGGTGCCGGACCTAAATGGTCCAAGGTACGATAATGAGAGCTGCCGTGTGATTGAAGATCATCAGAACTGCATGAGAAATGGACGGCCTGATTCGGGGTACCTTTATTGGAGGTGGAACCCAAGGGACTGTGAACTACCCAAGTTCAGTCCAAAGAAATTCCTTGACATGATGAGAGATAAATCATGGGCCTTTATTGGTGATTCCATCTCTCGCAACCATGTGCAATCTCTACTTTGCCTTCTCTCACAGGTGGAAGCAGCTGATGAGGTGTACCATGATGAAGAATATAAATCAAGGATATGGAAGTTCCCCTCTTACAACTTCACACTCTCGGCACTATGGAGCCCATTCCTTCTCAAAGCAGATATATTCGAGGACATCAATGGAGTTTCCTCTTCAGAAACACAGCTCCATCTTGACATTGTGGACGACAAGTGGACCAGCCAATACAAGAACTTTGACTACATTGTAATCGCAGGTGGCAAATGGTTCCTCAAAACAGCAATATACCATGAAAATAACACTGTAACAGGCTGCAACAAATGCCAGGGAAAGAATTTAACAGATGCAGGATACCAACATGCATACCGCAAAGCATTGCATCAGGTTTTTGATTTCATGACACATTCAGAGCACAAAGCGGTTGTGTTCTTCAGAACCACCACACCAGACCACTTTGAGAATGGGGAGTGGTTCAGTGGAGGGTACTGCAATAGGACAGTTCCCTTCAAAGAGGAGCAGATAGATGTGAGGTATGAGGATTCCATCATGAGAAGCATTGAACTTGAAGAGTTTCACAGGGCTAAGAATGCAAGTGCCAACTTCAAACTTTTGGACACAACTGGGCTTTCACTGTTGAGGCCCGATGGGCATCCAGGCCCATACCGCCAGTTTCACCCTTTGCTCAATGCTAAGGTCCAGAATGATTGCCTGCATTGGTGTCTCCCAGGCCCAATTGACTCCTGGAACGACTTACTTTTGCAAATGCTCACAATTTGA 1305 0.4575 MRETRSDLKPLSVQKHNYRHHHVFLKLAVSCLLVGLIIRLLLTDSFSFSSVVHNPPPLANAIAHSPFLSFPPPPSYSVDFPVNQTQTSPQDAVECDLFVGDWVPDLNGPRYDNESCRVIEDHQNCMRNGRPDSGYLYWRWNPRDCELPKFSPKKFLDMMRDKSWAFIGDSISRNHVQSLLCLLSQVEAADEVYHDEEYKSRIWKFPSYNFTLSALWSPFLLKADIFEDINGVSSSETQLHLDIVDDKWTSQYKNFDYIVIAGGKWFLKTAIYHENNTVTGCNKCQGKNLTDAGYQHAYRKALHQVFDFMTHSEHKAVVFFRTTTPDHFENGEWFSGGYCNRTVPFKEEQIDVRYEDSIMRSIELEEFHRAKNASANFKLLDTTGLSLLRPDGHPGPYRQFHPLLNAKVQNDCLHWCLPGPIDSWNDLLLQMLTI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1168 434 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 55 432 IPR029962 GO:0016413
Pvu6g1168 434 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 55 432 - -
Pvu6g1168 434 Pfam PMR5 N terminal Domain 94 146 IPR025846 -
Pvu6g1168 434 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 147 431 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1168 Pvu-Chr6 22719973 22723291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1168 - - var:108342030 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1168 6 22719973 22723291 Pvu10g1166 10 37563775 37567391 PCT