Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1166 ATGGTGAAGAGAGTGAGGTCTGATTCGGGACCATTGTCCTTGCAAAAGCACAACCATATGTGTGTCAAGTTAGGAGTCTCAATTTTCTTGGTGGGTCTCGCTGTTCGCCTTCTCTTGTGGGATTCATTCAGTTTCTCATCAGTGGTGGAGTCACCTCCTCTAGAAGATGCAAAAGCAGTTTCCCCTGTTTTATCTTCCTCTGATCTTCAGCCTTTTGATTCTGATGACTTTCCCGAAAGTAATCAGAATCAGACTCAAATCTCTAAGGATGAAAAATGTGATCTTTTTGTGGGAGAATGGGTGCCAGACAAATCTGGGCCTGAGTACACTAATGAGAGCTGCCGTGTGATTGAACCTCATCAAAATTGTATGAAGAATGGACGTCCTGATTCAGGGTACCTTAACTGGAGATGGAGTCCAAGAAACTGTGAATTGCCCAAGTTCAATCCCAAGAAGTTTCTTAAGTTCATGAGAAACAAATCATTGTCTTTCATTGGTGATTCCATCTCCCGTAACCATGTTCAGTCCCTACTTTGCATTCTCTCAAAGGTGGAACCAGCTGTTGAAATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGCTCTCATAACTTCACACTCTCAGTAATCTGGACCCCTTTCCTTGTTAAAGCAGCTATATTTGAGGACATGAATGGAGTTACCTCATCAGAGATACAACTTTATGTTGACACTCTAGACCAGTGGACCCACCAATATGAGAACTTTGACTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACAGAACAGTCACTGGCTGCCACTACTGCCCTGGAAAGAACTTAACAGAGCTAGGATTTGACTACGCATACCGCAAAGTATTACAAGAAGTTTTCAAGTTCTTCACAAACTCTAACCACAAGGCCACTGTTCTCTTCAGAACCACCACACCTGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTACTGCAACAGAACTGTACCCTTCAAAGAGGGTCAGATACATATGATAGATGTGGATTCCATCATGAGAGGTATTGAACTTGAAGAGTTTGAGAAGGCAACTTCCCTAGGATCTCAAAGGGTGAACTTGAAACTTTTGGACACAACTCTGCTTTCATTGCTGAGACCAGATGGACATCCTGGACCTTACAGGAAGTTCCAACCATTTGCAAAAGACAAGAATGCTAAAGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATTGACTCATGGAATGACATAATAATGCAAATGATAGTCAATGCCTAA 1317 0.4199 MVKRVRSDSGPLSLQKHNHMCVKLGVSIFLVGLAVRLLLWDSFSFSSVVESPPLEDAKAVSPVLSSSDLQPFDSDDFPESNQNQTQISKDEKCDLFVGEWVPDKSGPEYTNESCRVIEPHQNCMKNGRPDSGYLNWRWSPRNCELPKFNPKKFLKFMRNKSLSFIGDSISRNHVQSLLCILSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSSEIQLYVDTLDQWTHQYENFDYVVIGGGKWFLKTAIYHENRTVTGCHYCPGKNLTELGFDYAYRKVLQEVFKFFTNSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKATSLGSQRVNLKLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMIVNA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1166 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 71 436 IPR029962 GO:0016413
Pvu10g1166 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 71 436 - -
Pvu10g1166 438 Pfam PMR5 N terminal Domain 91 144 IPR025846 -
Pvu10g1166 438 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 434 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1166 Pvu-Chr10 37563775 37567391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1166 - - gmx:100305942 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1166 10 37563775 37567391 Pvu10g1166 10 37563775 37567391 ECH
Pvu6g1168 6 22719973 22723291 Pvu10g1166 10 37563775 37567391 PCT