Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1163 ATGTTAGAGAAAGTGGAGGAGGAGTTTAATATGGAGAAAGTTATAGAAGAATTTGAGTTATTGTCAAAGGATGCGGAAAGGGTTCAGAGGGAAACTCTGAAAAAGATATTGGAAGATAACGCATCAGCTGAGTATTTGCAGAGTTTGGGTCTCAATGGAAGAACTGACCCCGAGAGTTTCAAGGCCTGTGTTCCACTGGTTACCCACAAAGAATTGGAACCTTACATATACAGAATTATTGATGGTGATGCTTCTCCTATCCTCACTGGCAAGCGCATCACAACCATGTCTTTAAGTTCTGGCACTACTCAGGGGAAGCCAAAATATGTACCCTGGAACGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGAGAGTTTCCCATAAAAAATGGGAAGGCTTTGAGCTTTATATACGGGAGCAAACAGTTCAAAACAAAGGGGGGTCTGGCAGCCAGAACTGCTACAAGCAATGTGTTCCGTAATGCTGGTTATAAGTGTGCAATGAGGGCACTCCAATCCCAATGCTGCAGTCCAGACGAAGTGATATTTGGTCCTGATTTCTTCCAATCCTTGTACTGCCATCTGTTGTGTGGTTTGATTTTCCGGGAGGAGGTTCAATTTGTGTCTTCTACATTTGCTCATAGTATTGTCCACGCTTTTAGAACCTTTGAACAAGTTTGGGAAGAGCTGTGTATTGATATTAGAGAAGGAGTTCTCACCAGCCGTGTCACCGTACCTTCCATTCGAATGGCTATGTCTAAACTGCTCAAGCCAAACTCGAAATTAGCCAACTTGATCCACAAAAAATGTACGGGGTTGAGCAACTGGTACGGCTTGATACCAGAGCTTTTTCCCAATGCTAAGTATATTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAGAAGTTGAGGCACTATGCAGGGGAGCTGCCTTTATTAACTGCTGACTATGGATCTTCTGAGGGATGGATAGCAGCAAATGTGAACCCACAACACCCCCCTGAGTGTGCCACATATGCTGTGCTTCCTCACATTGGTTACTTTGAATTCATCCCTCTCTCAGATCTTGACAACACCAGGGGTGAACCAGATTTCCTTTGTATTGATTCTCAGCCTGTGAGCCTGACAGAAGTCAAGGTCGGTGAGGAGTATGAAGTTGTTATGACCAATCCAGCAGGATTATACCGGTATAGATTGGGGGATGTGGTCAAGGTTATGGGATTCCACAATTCAACTCCAGAACTGAAGTTTATTCGGCGTAGCACTCTTCTGCTCAACATTAACATTGACAAGAACACTGAGAAGGATTTACAGTTAGCTGTGGAAGCAGCTGCAAAGTTGTTAGCAGAAGAAAAAGTGGAAGTAGTTGATTTCAGTAGCCACGTTGATTTATCCGAAGAACCGGGACACTATGTGATCTTCTGGGAAATCAGTGGGGAAGCAAGTGAAGAACTACTGCACGAATGCTGTAACTGTTTGGACAAGTCTTTTGTTGATGCAGGCTACACCAGTTCTCGCAAAGTAAACTGCATCGGTGCCCTCGAACTACGAGTTGTTCGGAGGGGAACATTCCAGAAGATTCTGGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGCCTTACAAACGCCATGGTGTTGCAAATCTTGGGTGAAAATGTTGTGAATAACTATCTCAGTACTGCTTTCTAA 1749 0.4368 MLEKVEEEFNMEKVIEEFELLSKDAERVQRETLKKILEDNASAEYLQSLGLNGRTDPESFKACVPLVTHKELEPYIYRIIDGDASPILTGKRITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFRNAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCIDIREGVLTSRVTVPSIRMAMSKLLKPNSKLANLIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPQHPPECATYAVLPHIGYFEFIPLSDLDNTRGEPDFLCIDSQPVSLTEVKVGEEYEVVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSTLLLNINIDKNTEKDLQLAVEAAAKLLAEEKVEVVDFSSHVDLSEEPGHYVIFWEISGEASEELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVGLTNAMVLQILGENVVNNYLSTAF* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1163 582 Coils Coil 11 31 - -
Pvu6g1163 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Pvu6g1163 582 Pfam GH3 auxin-responsive promoter 17 558 IPR004993 -
Pvu6g1163 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1163 Pvu-Chr6 22669612 22673787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1163 6 580 EF-hand Containing Proteins AT1G23160 38.136 7.81e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1163 K14506 - gmx:100794598 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1163 6 22669612 22673787 Pvu10g1163 10 37505751 37510675 PCT